Protein Info for AO356_09865 in Pseudomonas fluorescens FW300-N2C3

Annotation: histidine kinase

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 400 450 500 550 600 650 700 744 PF08446: PAS_2" amino acids 16 to 118 (103 residues), 81.3 bits, see alignment E=2.1e-26 PF01590: GAF" amino acids 148 to 311 (164 residues), 46.3 bits, see alignment E=1.6e-15 PF00360: PHY" amino acids 336 to 502 (167 residues), 149.3 bits, see alignment E=1.9e-47 PF00512: HisKA" amino acids 519 to 590 (72 residues), 54 bits, see alignment E=3.6e-18 PF02518: HATPase_c" amino acids 636 to 742 (107 residues), 106.3 bits, see alignment E=3.2e-34

Best Hits

KEGG orthology group: None (inferred from 95% identity to pba:PSEBR_a334)

Predicted SEED Role

"Phytochrome, two-component sensor histidine kinase (EC 2.7.3.-)" in subsystem Oxidative stress or Oxygen and light sensor PpaA-PpsR (EC 2.7.3.-)

Isozymes

Compare fitness of predicted isozymes for: 2.7.3.-

Use Curated BLAST to search for 2.7.3.-

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See A0A0N9WQE5 at UniProt or InterPro

Protein Sequence (744 amino acids)

>AO356_09865 histidine kinase (Pseudomonas fluorescens FW300-N2C3)
MNTENQEAFEELLANCADEPIRFPGTIQPHGVLLMLSEPDFVIRQVSANVLQLMAQDPHR
LLGQTLDALLGLEQAEAILIACRAAPESDNVPVAIVVNQQRFDALVHRHQGALIVELEQH
LSDYRPEGVSGEANMGRMLQRLQSAKTLQALYEISVREIQAMTGYDRVLIYRFEEEGHGQ
VIAEASAPSMELYKGLFFPASDIPEQARELYRINWLRIIPNADYTPVPLVPQLRPDTQAP
LDLSFATLRSVSPIHRQYMKNMGVLSSMSISLMEGERLWGLISCGNRQPLLVPHEMRMAC
QTIGQVLSLQISAMQALELTRQRDAKLEDLKVLAAVMAESSDNVFDGLSQEPQRLMELTG
ASGVAILEDNKLHRHGQCPEPEQIRELHKWILETGKPVFSHHNLSSVFPAAQAYQDVASG
VLAIHLPKPVENGVLWFRPEVKQTLQWSGDPQKPLDLENSETGLRLRPRTSFEIWKVEMA
GISTKWSHGDLFAANDLRRSALENDLARQVHKERLAVQARDELVAVVSHDLRSPMTVISM
LCGMMQKAFSSDGSHSSKRIASAIDTMQQATSRMNALLEDLLDTSRIDAGRYTINPQPMD
VSQIFEDACSLLTPLAAAKAIDISFNAEPNLRINADPERLFQVLSNLIGNAIKFTPQQGS
VGISAMSVGNEIVFSVRDTGEGITPEQLPHVFERYWTSKEGNPNGTGLGLYISKGIVQAH
GGKLHAESQPGQGSEFRFTVPRID