Protein Info for AO356_09625 in Pseudomonas fluorescens FW300-N2C3

Annotation: sulfonate ABC transporter substrate-binding protein

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 400 450 488 transmembrane" amino acids 35 to 56 (22 residues), see Phobius details amino acids 62 to 82 (21 residues), see Phobius details amino acids 101 to 123 (23 residues), see Phobius details amino acids 135 to 159 (25 residues), see Phobius details amino acids 164 to 186 (23 residues), see Phobius details amino acids 198 to 222 (25 residues), see Phobius details amino acids 238 to 262 (25 residues), see Phobius details amino acids 273 to 295 (23 residues), see Phobius details amino acids 303 to 319 (17 residues), see Phobius details amino acids 331 to 352 (22 residues), see Phobius details amino acids 359 to 380 (22 residues), see Phobius details amino acids 401 to 422 (22 residues), see Phobius details amino acids 431 to 454 (24 residues), see Phobius details PF02133: Transp_cyt_pur" amino acids 21 to 443 (423 residues), 181.2 bits, see alignment E=1.7e-57

Best Hits

KEGG orthology group: None (inferred from 97% identity to pba:PSEBR_a379)

Predicted SEED Role

No annotation

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See A0A0N9W1J6 at UniProt or InterPro

Protein Sequence (488 amino acids)

>AO356_09625 sulfonate ABC transporter substrate-binding protein (Pseudomonas fluorescens FW300-N2C3)
MAVTRTRASSKPLIEKRSIDYIPEAERHGRLLSQFTLWMGANLQITAIVTGALAVVLGGD
VFWSLIGLLIGQVLGGGVMALHAAQGPKLGLPQMISSRVQFGVYGAAIPIVLVCLMYLGF
TATGTVLSGQALGQLFGVSDSVGILIFASVIVLVTVLGYRVIHFIGRVASIIGVIAFVYL
FARLISQTDVGALLQIRHFSWSSFLLAVSLAASWQIAFGPYVADYSRYLPSKTSSVKTFF
AAGAGSVIGAQVAMILGVFAAASANGQFAGHEVAYIVGLGGTGATAALLYFSIAFGKVTI
STLNSYGSFMCIATIISGFRGHLNVTRVQRLVFVLFIVGAATLIALLGQHSFLGAFKSFI
LFLLAFFTPWSAINLVDYYCITRERYDVPALADPNGRYGRWNTLGISVYVFGVLVQLPFI
ATKFYTGPLVGAMGGVDISWIIGLVVPAALYYVLAKKWHSAVPDQLILPLEQDAVDAQPS
RAGRIQAV