Protein Info for AO356_09595 in Pseudomonas fluorescens FW300-N2C3

Updated annotation (from data): Imidazolonepropionase (EC 3.5.2.7)
Rationale: Specifically important for utilizing L-Histidine. Automated validation from mutant phenotype: the predicted function (IMIDAZOLONEPROPIONASE-RXN) was linked to the condition via a MetaCyc pathway. This annotation was also checked manually.
Original annotation: imidazolonepropionase

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 400 transmembrane" amino acids 270 to 288 (19 residues), see Phobius details TIGR01224: imidazolonepropionase" amino acids 21 to 396 (376 residues), 485.6 bits, see alignment E=4.4e-150 PF01979: Amidohydro_1" amino acids 57 to 383 (327 residues), 80.3 bits, see alignment E=1.7e-26 PF07969: Amidohydro_3" amino acids 105 to 375 (271 residues), 61.3 bits, see alignment E=1.3e-20

Best Hits

Swiss-Prot: 90% identical to HUTI_PSEPF: Imidazolonepropionase (hutI) from Pseudomonas fluorescens (strain Pf0-1)

KEGG orthology group: K01468, imidazolonepropionase [EC: 3.5.2.7] (inferred from 97% identity to pba:PSEBR_a385)

MetaCyc: 84% identical to imidazolonepropionase (Pseudomonas fluorescens)
Imidazolonepropionase. [EC: 3.5.2.7]

Predicted SEED Role

"Imidazolonepropionase (EC 3.5.2.7)" in subsystem Histidine Degradation (EC 3.5.2.7)

MetaCyc Pathways

KEGG Metabolic Maps

Isozymes

No predicted isozymes

Use Curated BLAST to search for 3.5.2.7

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See A0A0N7H1W2 at UniProt or InterPro

Protein Sequence (400 amino acids)

>AO356_09595 Imidazolonepropionase (EC 3.5.2.7) (Pseudomonas fluorescens FW300-N2C3)
MKTLWQNCHAATMAQGVYSIIEDAAIVTQGEHIHWIGPRAELPMGDYPAVNDLKGAWVTP
GLIDCHTHTVFGGNRSGEFEQRLQGVSYAEIAAAGGGIASTVRATRAASEDELFASAAKR
LKGLMHDGVTTVEIKSGYGLDLASERKILRVIRRLGAELPVSVRSTCLAAHALPPEYKDR
ADDYIEHICTEMLPALAAEGLVDAVDAFCEYLAFSPAQVERVFITARQLGLPVKLHAEQL
SSLHGSSLAARYQALSADHLEFMTEDDAKAMAASGTVAVLLPGAFYFLRETQLPPMDALR
KHGVKIAVASDLNPGTSPALSLRLMLNMACTCFRMTPEEALAGATIHAAQALGMAQTHGS
LEVGKVADFVAWHIDRPADLAYWLGGDLEKRVVRHGVEID