Protein Info for AO356_08560 in Pseudomonas fluorescens FW300-N2C3

Annotation: IMP dehydrogenase

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 100 200 300 400 500 600 700 800 900 1000 1097 PF08379: Bact_transglu_N" amino acids 6 to 83 (78 residues), 92.9 bits, see alignment 2.5e-30 PF01841: Transglut_core" amino acids 132 to 246 (115 residues), 64.9 bits, see alignment E=1.2e-21 PF09899: DUF2126" amino acids 276 to 1089 (814 residues), 1357.6 bits, see alignment E=0

Best Hits

KEGG orthology group: None (inferred from 59% identity to atu:Atu3865)

Predicted SEED Role

"Large protein containing transglutaminase-like domain"

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See A0A0N9W149 at UniProt or InterPro

Protein Sequence (1097 amino acids)

>AO356_08560 IMP dehydrogenase (Pseudomonas fluorescens FW300-N2C3)
VSIHVALHHVTHYRYDRAVELGPQIVRLRPAAHSRTRILSYALKVSPEQHFINWQQDPQG
NYLARLVFPEKTRELRIEVDLLAEMAVFNPFDFFLEPYAEKIPFAYAADERKELAPYLET
LPLTPRFQAYLDGIDRTPLPAVDFLVALNQRLSEDINYLIRMEPGVQTPEHTLEHASGSC
RDSAWLLVQLLRNLGLAARFVSGYLIQLTADVKSLDGPSGTDVDFTDLHAWCEVYLPGAG
WIGLDATSGLFAGEGHIPLACSPDPSSAAPISGLVEPCECEFSHEMSVERVWEAPRVTKP
YTDAQWLAIQALGRQIDADLLEGDVRLTMGGEPTFVSIDDPDGAEWNTAALGPDKRRLSA
ELFQRMRNHYAPKGLVHFGQGKWYPGEQLPRWSLNCYWRRDGVPIWHNSALIADEQEDYG
ADGELAGRFLASVAERLKIPARFVFPAYEDNFYYLWREGALPSNVTAEDPRLEDALERAR
LRKVFSQGLDKVIGQVLPLARTAKGDQWQSGRWYLRDNHCRLVPGDSPLGYRLPLASQPW
VTAAEYPFIHPTDPNQDLPELPGTEQLARHGEAATEQERVPEIDKSADWLTRTAFCAEAR
EGRLYLFMPPLERVEDYLELVSAIEATAEELRCPVLLEGYEPPSDPRLSNFRITPDPGVI
EVNVQPSATWDELVERTEFLYEEARQTRLTTEKFMIDGRHTGTGGGNHFVLGGATPADSP
FLRRPDLLRSLISYWHNHPSLSYLFSGLFIGPTSQAPRVDEARNDALYELEIAFAQMPQP
GEACPPWLVDRLLRNLLIDVTGNTHRAEFCVDKLYSPDGATGRLGLLELRAFEMPPHARM
SLAQQLLLRALVARFWREPYAPAKLARWGTELHDRFLLPHFIEQDFADVIHELNAAGYPL
RAEWFAAHLEFRFPKVGDYAVSGIELQLRQALEPWHVLGEEGAVGGTVRYVDSSLERLQV
KLSGLAPQRYLLTCNGVPVPLQPTGRVGEFVAGVRFRAWQPANCLQPTIPVHAPLVFDLL
DTWMQRSVGGCQYHVAHPGGRNYDSLPVNANEAESRRMARFFRLGHTPGKLPIPSLAVDD
EFPLTLDLRRFQGAPKV