Protein Info for AO356_07845 in Pseudomonas fluorescens FW300-N2C3

Annotation: MFS transporter

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 402 transmembrane" amino acids 21 to 44 (24 residues), see Phobius details amino acids 56 to 77 (22 residues), see Phobius details amino acids 86 to 105 (20 residues), see Phobius details amino acids 111 to 136 (26 residues), see Phobius details amino acids 150 to 171 (22 residues), see Phobius details amino acids 177 to 197 (21 residues), see Phobius details amino acids 221 to 240 (20 residues), see Phobius details amino acids 260 to 279 (20 residues), see Phobius details amino acids 291 to 309 (19 residues), see Phobius details amino acids 315 to 336 (22 residues), see Phobius details amino acids 349 to 372 (24 residues), see Phobius details amino acids 378 to 397 (20 residues), see Phobius details PF07690: MFS_1" amino acids 24 to 364 (341 residues), 109.1 bits, see alignment E=1.2e-35

Best Hits

KEGG orthology group: None (inferred from 56% identity to ppf:Pput_4024)

Predicted SEED Role

"Multidrug resistance protein B"

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See A0A0N9WPG2 at UniProt or InterPro

Protein Sequence (402 amino acids)

>AO356_07845 MFS transporter (Pseudomonas fluorescens FW300-N2C3)
MKDVSGELAVQGGFKVYTRPVVLLLSATFILTVARALALPYLVVYFSQAFGLGVTDIGLV
VGGALIVSSILGVYGGFLVDRFSNYRILLGAATLFALAFAVAYQVASLVPFIIAIVVVNL
AYAVIDIAVKSGIGFLVTVDKRASVFSMKYTLTNVGYAIGPFLGVLCAKISPGLPFAVSA
LIGVAFVVLYSGLGARLPRGEGVERPNRDFARVLVHLVRNYKLVCFTIGGVLSAVVFGQF
TAYLSQYLIVTSTPENTYKIINYLVTTNACVVIGLQYLVGSRINQNNLFRMLMLGMLFFV
VGLMGFCYAQTPLAWVLAMIVFTVGEIIIIPVEYLFIDYIAPEDMRGVYYGAQNLSNLGA
ALGPVLCGVALSLFAPWAVFYLLSMCVVVASLFYFLGSRRER