Protein Info for AO356_01065 in Pseudomonas fluorescens FW300-N2C3

Annotation: hypothetical protein

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 400 436 PF12727: PBP_like" amino acids 73 to 240 (168 residues), 29 bits, see alignment E=8.9e-11 PF12849: PBP_like_2" amino acids 75 to 289 (215 residues), 106.2 bits, see alignment E=4e-34 PF00691: OmpA" amino acids 335 to 429 (95 residues), 57.2 bits, see alignment E=2.7e-19

Best Hits

KEGG orthology group: K02040, phosphate transport system substrate-binding protein (inferred from 92% identity to pba:PSEBR_a3732)

Predicted SEED Role

"Phosphate ABC transporter, periplasmic phosphate-binding protein PstS (TC 3.A.1.7.1)" in subsystem High affinity phosphate transporter and control of PHO regulon or Phosphate metabolism (TC 3.A.1.7.1)

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See A0A0N9X5X7 at UniProt or InterPro

Protein Sequence (436 amino acids)

>AO356_01065 hypothetical protein (Pseudomonas fluorescens FW300-N2C3)
MGLWLPFVAWAGNLPIPEQGPALRLQGSNTIGAALGPALVRGLMEDQGLLRVSSEITGRD
NEQRIVGLTADGRRVEVDIAAHGSSTGFTALKQASADLAASSRPIKDSELKELSSLGDLK
SPAAEQVIAIDGLAIILHSSNPLRQLDTVQLARMFSGEAKTWESVGGTGGPIHLYARDEQ
SGTYDTFKELVLSRQGKRLDPTARRFESSEQLSDAVSQDPQGIGFIGLPYVRQAKALAIV
DGASQPMLPLNHLIATEDYPLSRRLFFYLPPWGTNPWAEALVAFTQSDKGQAIVAANGFI
AQTVQAMAVTPNALMPEGYQALSRHAQRLTVNFRFEEGSASLDNKAHQDLSRVLDYIQQH
GKADRRVTLVGFGDAKDDPARADLLSKLRAMAVRRELVKYGVALREVRGFGALMPVAANS
GDEGRVRNRRVEVWVY