Protein Info for AO353_28880 in Pseudomonas fluorescens FW300-N2E3

Annotation: dienelactone hydrolase

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 signal peptide" amino acids 1 to 20 (20 residues), see Phobius details PF01738: DLH" amino acids 72 to 178 (107 residues), 22.3 bits, see alignment E=2.6e-08 PF03403: PAF-AH_p_II" amino acids 73 to 115 (43 residues), 20.4 bits, see alignment 4.9e-08 PF00561: Abhydrolase_1" amino acids 80 to 175 (96 residues), 26.1 bits, see alignment E=2e-09 PF12146: Hydrolase_4" amino acids 81 to 175 (95 residues), 29.5 bits, see alignment E=1.4e-10 PF12697: Abhydrolase_6" amino acids 82 to 300 (219 residues), 40.6 bits, see alignment E=1.4e-13 PF00326: Peptidase_S9" amino acids 96 to 177 (82 residues), 26.5 bits, see alignment E=1.3e-09

Best Hits

KEGG orthology group: None (inferred from 76% identity to pba:PSEBR_a3976)

Predicted SEED Role

"Probable lipoprotein signal peptide"

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See A0A0N9X2F9 at UniProt or InterPro

Protein Sequence (350 amino acids)

>AO353_28880 dienelactone hydrolase (Pseudomonas fluorescens FW300-N2E3)
LKTALGALLLTCLTTNALADVNSVGFQSSTLPDPHNERPLEMVVWYPSTTTVTPQLIGDD
VVFVGASAVRNAPPSAGEHPLVVLSHGFRGNWNNQNWLASALAHKGYIVAAVNHPGTTTH
DRSPQAAAQLWQRPIDLHRAIEAVTTQPEKFGVVAKRQIAVVGHSLGGWTAMEIAGARFD
PALFARDCKLHPQLSSCTNYQKINPESTPALKAGLAGDLRDQRVTAVVSLDLGLSRGMTD
ESLAALPVPVLVIAAGAPSVELPAQLESANLATRLPQASSRYVEISDASHFSFLSICKPG
AVALLEEDIPGDGIICGDGDNARPREVIQQQVTSLITEFLTQSANNKVEL