Protein Info for AO353_28855 in Pseudomonas fluorescens FW300-N2E3

Annotation: MFS transporter

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 402 transmembrane" amino acids 24 to 42 (19 residues), see Phobius details amino acids 62 to 86 (25 residues), see Phobius details amino acids 93 to 114 (22 residues), see Phobius details amino acids 121 to 140 (20 residues), see Phobius details amino acids 152 to 172 (21 residues), see Phobius details amino acids 178 to 200 (23 residues), see Phobius details amino acids 227 to 251 (25 residues), see Phobius details amino acids 262 to 281 (20 residues), see Phobius details amino acids 288 to 306 (19 residues), see Phobius details amino acids 312 to 331 (20 residues), see Phobius details amino acids 348 to 369 (22 residues), see Phobius details amino acids 375 to 395 (21 residues), see Phobius details PF07690: MFS_1" amino acids 33 to 339 (307 residues), 124.2 bits, see alignment E=3e-40

Best Hits

KEGG orthology group: None (inferred from 65% identity to bvi:Bcep1808_4733)

Predicted SEED Role

"Major facilitator family transporter"

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See A0A0N9WN78 at UniProt or InterPro

Protein Sequence (402 amino acids)

>AO353_28855 MFS transporter (Pseudomonas fluorescens FW300-N2E3)
MTSQFENGSLTTSGDTEYLTTGRLPLAALLALTMGSFIATANETVPAGLLPQIAEAFGVS
QAWAGQMVTLCALGSGLAAIPLTLALQGWRRRLVLLLAVGVFCACNAVTALSPWFSLTLA
ARFMVGIATGLAWSLLAGYARRLVAPQQHGRAMALAMLGIPLALALGVPLSAWLGKLLGW
RCVFGTLSGLSLLLMAWIYLKVPDYPGQRSDRRLPLRRVLQTPGVRPVLAVVMLWILAHY
TLYTYIAAFLASVGLADQIDRGLLSFGIAALFGLWMIGTLIDGRLRSLVLLSLTAFILVS
FALGLGDLPVSAIYIGIVLWGMSFGGAPTLLQTSLADVASDGADIAQSMLVTVFNLAFAG
SGVIGGILLETWGAGAIPWVALALLLPALLIVSIAKGHAFGR