Protein Info for AO353_28100 in Pseudomonas fluorescens FW300-N2E3

Annotation: MFS transporter

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 400 450 499 transmembrane" amino acids 54 to 75 (22 residues), see Phobius details amino acids 82 to 101 (20 residues), see Phobius details amino acids 108 to 129 (22 residues), see Phobius details amino acids 141 to 163 (23 residues), see Phobius details amino acids 172 to 192 (21 residues), see Phobius details amino acids 203 to 221 (19 residues), see Phobius details amino acids 236 to 259 (24 residues), see Phobius details amino acids 271 to 291 (21 residues), see Phobius details amino acids 308 to 325 (18 residues), see Phobius details amino acids 336 to 355 (20 residues), see Phobius details amino acids 361 to 382 (22 residues), see Phobius details amino acids 402 to 422 (21 residues), see Phobius details amino acids 466 to 492 (27 residues), see Phobius details TIGR00711: drug resistance MFS transporter, drug:H+ antiporter-2 (14 Spanner) (DHA2) family" amino acids 18 to 491 (474 residues), 245.8 bits, see alignment E=4.1e-77 PF07690: MFS_1" amino acids 27 to 413 (387 residues), 139.2 bits, see alignment E=1.7e-44 PF00083: Sugar_tr" amino acids 49 to 189 (141 residues), 37.6 bits, see alignment E=1.3e-13

Best Hits

KEGG orthology group: None (inferred from 61% identity to npp:PP1Y_Mpl9423)

Predicted SEED Role

"multidrug resistance protein B"

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See A0A0N9WMW8 at UniProt or InterPro

Protein Sequence (499 amino acids)

>AO353_28100 MFS transporter (Pseudomonas fluorescens FW300-N2E3)
MNASLAGNPAGEGSRTLRFAALLATYMQSANLPLPNAALRFIQGAISMTDDEAGWVFTSY
LAASAITLPIAQWLAGRYGLKVVYQAAIALFVLGLLLAMQATTPLEFVGARIIQGAASGL
LAPLSMAIAMETLPPARRAKFGSMFTAIVLLGIVSGPSIGGWVCEHYDWRSMFSISLPLT
AFIFVVVTLLLAEKKAEKSLPFDFFGVGTFTLGMIGLQMLLDRGERLDWFASPEIWLEAL
AGALGLYLFVVHVLTAKVHFLNKNLFKDRNFVLSTIIFFALGFVLLPTMALTSPMLDEIL
GYPPDTTGYLTIPRGVGLVGAFLLMGRVPARIDSRLFVAAGVALVAYANWLMLGYSPLMD
WWPVAVAGALQGIGLGILMPAISKVAFSTLDPRFRPEGTGFFNLARVYGSTLGVAIVQVF
FFNNTQTMHVALASHLTPYRAAAHSMTASASLQALGGLNEMITGQAAFIAVIGQFKILML
AMLVVSPLVVFLRKPVPTN