Protein Info for AO353_27960 in Pseudomonas fluorescens FW300-N2E3

Annotation: SAM-dependent methyltransferase

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 348 PF21320: HTH_65" amino acids 24 to 90 (67 residues), 36.6 bits, see alignment E=2e-12 PF13489: Methyltransf_23" amino acids 148 to 286 (139 residues), 57.4 bits, see alignment E=7.5e-19 PF01209: Ubie_methyltran" amino acids 165 to 272 (108 residues), 28.7 bits, see alignment E=4.1e-10 PF00891: Methyltransf_2" amino acids 166 to 275 (110 residues), 28.2 bits, see alignment E=5.7e-10 PF13847: Methyltransf_31" amino acids 167 to 281 (115 residues), 61.1 bits, see alignment E=5.4e-20 PF05175: MTS" amino acids 168 to 278 (111 residues), 31.8 bits, see alignment E=5.4e-11 PF02390: Methyltransf_4" amino acids 172 to 216 (45 residues), 28.9 bits, see alignment 3.8e-10 PF13649: Methyltransf_25" amino acids 172 to 266 (95 residues), 53.8 bits, see alignment E=1.3e-17 PF08242: Methyltransf_12" amino acids 174 to 267 (94 residues), 53.2 bits, see alignment E=2.1e-17 PF08241: Methyltransf_11" amino acids 174 to 269 (96 residues), 54 bits, see alignment E=1.1e-17

Best Hits

KEGG orthology group: None (inferred from 82% identity to pfo:Pfl01_2079)

Predicted SEED Role

"SAM-dependent methyltransferases"

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See A0A0N9WRG1 at UniProt or InterPro

Protein Sequence (348 amino acids)

>AO353_27960 SAM-dependent methyltransferase (Pseudomonas fluorescens FW300-N2E3)
MDEAKLNDFMGKVVSDMGGAAMLANMILGDELGLYRAMADSQPVTPEELASKTGCNARLL
REWLSAHAASGYMEHVDGKFRLPEEQALALAIEDSPVYVPGGAAVIASFYHDKDKLIAAM
RGNGALAWGDHHSCMFKGTERFFRPGYRAHLVGEWLPALEGVVDKLKAGAKVADVGCGHG
ASTVVMAKAFPASNFVGFDYHAPSITTATQRAEEGGVADSARFVQSTAKNFPGNDYDLIC
YFDCLHDMGDPVGAAKHAYQALKPDGTVLLVEPYANDHLDENATPVGRLFYAASTFICTP
NSLSQEVGLGLGAQAGEARLRDVFTQAGFTHFRRAAETPFNLILEARK