Protein Info for AO353_27075 in Pseudomonas fluorescens FW300-N2E3

Annotation: aldehyde oxidase

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 400 450 500 550 600 650 700 750 800 850 900 943 signal peptide" amino acids 1 to 34 (34 residues), see Phobius details transmembrane" amino acids 903 to 923 (21 residues), see Phobius details TIGR01409: Tat (twin-arginine translocation) pathway signal sequence" amino acids 6 to 33 (28 residues), 18.5 bits, see alignment (E = 9.8e-08) PF02738: MoCoBD_1" amino acids 265 to 484 (220 residues), 124.6 bits, see alignment E=3.6e-40 PF20256: MoCoBD_2" amino acids 516 to 602 (87 residues), 36.2 bits, see alignment E=5e-13 amino acids 770 to 881 (112 residues), 59.9 bits, see alignment E=3.1e-20

Best Hits

KEGG orthology group: None (inferred from 90% identity to pfo:Pfl01_1905)

Predicted SEED Role

"Isoquinoline 1-oxidoreductase beta subunit (EC 1.3.99.16)" in subsystem N-heterocyclic aromatic compound degradation (EC 1.3.99.16)

Isozymes

Compare fitness of predicted isozymes for: 1.3.99.16

Use Curated BLAST to search for 1.3.99.16

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See A0A0N9X1U2 at UniProt or InterPro

Protein Sequence (943 amino acids)

>AO353_27075 aldehyde oxidase (Pseudomonas fluorescens FW300-N2E3)
MSNREISRRSFLQGGLIAGVSVTLTPLSSQALAALMENSVTVPSEQWLGNNGKARMRNDS
LSKVCGSKVFARDIRAKDMPGWPQQQGHAMLLKTIRADRIYDGFDLSLLGAELQPDRIVT
AEDLDKDGIVFPEDHAPDPLLPIGKVPMFIGHPVAILIWNDFERFRQAKNTLKFNDKAIR
YGAEAPFYTRDPYGSFRYVRVGGATSADEDEFASLKDSILFPMIRERRPVWNTQPNLHGN
LTERGLFYADRMKQQLETPPEGWMVFDERYKTPSIEPAAMEPDNGNGWYDPATKTLHFVV
ATQCPLEAATETAKMIAPSRFGLSTLNMHPGYTVGYGSKDHNIFVYYAALAALYGGGVPV
RLANDRYEQFQSGIKRHPFDIRYQLAVDKQDHSFKIFRADMNVDGGGRINYSPSVAAVGA
TAAQSIYYMPQNDLQVTAYHSRGVEAGSMRGYGTLQSMAATEMMVDEIADRLGIDAIDLR
KKNVLLSGMKNTQGAVPAGALRLHEILEKAAGNELWKNRHALKKQEDAKDPDNWYGIGFA
ICQKDFGTGSEAPMASIEFSADGHITLRHIGIEIGTGMSTSQALVVADFLGNPASEVKTG
ETEWKELQLTSSGNPYLMSQAEQDTVLRNPRWVGKIASASSATNSAYYFSHATREAARVL
FNHGLWPAAVEIWRQGPFGGQANPYVLRREDAHWVDGKLTANGMEPLPFAVLAKRAHERG
LVTGATVHGFNRWSWAEAEYSINGVRERLPLDGLAVKYGDGAPNAIKAQMNSAGFHLLDR
QNIAYPATQLNNAAVTYYSPVATLVELKVNKGSGEVKVLNHHSWLECGRVLVPELVKGQL
EGGIAMGIGHALLEEMPLYEGGPGEGDWNFNRYRLPRAKDVAVWTQTSEILPPLSPSDPS
KGIAEVVMIPVVGAIANAVAHAIGKRVRDLPITPARIKEALNG