Protein Info for AO353_25570 in Pseudomonas fluorescens FW300-N2E3

Annotation: glycosyltransferase

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 400 450 500 534 signal peptide" amino acids 1 to 31 (31 residues), see Phobius details transmembrane" amino acids 64 to 82 (19 residues), see Phobius details amino acids 89 to 108 (20 residues), see Phobius details amino acids 114 to 130 (17 residues), see Phobius details amino acids 138 to 156 (19 residues), see Phobius details amino acids 167 to 197 (31 residues), see Phobius details amino acids 204 to 226 (23 residues), see Phobius details amino acids 264 to 285 (22 residues), see Phobius details amino acids 292 to 314 (23 residues), see Phobius details amino acids 320 to 336 (17 residues), see Phobius details amino acids 348 to 368 (21 residues), see Phobius details amino acids 378 to 398 (21 residues), see Phobius details amino acids 404 to 423 (20 residues), see Phobius details PF02366: PMT" amino acids 40 to 215 (176 residues), 34.5 bits, see alignment E=1.7e-12 PF13231: PMT_2" amino acids 72 to 216 (145 residues), 34.2 bits, see alignment E=3e-12

Best Hits

KEGG orthology group: None (inferred from 70% identity to pfl:PFL_3051)

Predicted SEED Role

"4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferases of PMT family" in subsystem Pterin biosynthesis

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See A0A0N9VZT7 at UniProt or InterPro

Protein Sequence (534 amino acids)

>AO353_25570 glycosyltransferase (Pseudomonas fluorescens FW300-N2E3)
VHAYPSTGIRQQSLGLGLLALLLFCAGVYQQSAIGFDTRFVLFAQEMLRHGPGFFPTTYG
QPYADYWATSTFFTWLLSLPFGQVNALTAWLPSAIASATIVTLMYRLVAPYSRTWALISI
ALMMLSNTFITETRAVSLDQMVAAVTFAVFYLGYAADHFQAPRRLPLILALLVLGFAIRG
PIGLVVPTGVLCSYYLLNGQWRRMITIGLLAALLLAAGIGLLLWLANASGGPTFVQDVIR
MQFMGRMDGREGASGPLFYFSSSLGNYALAYPLAVVVLAAVLLFGRKDRGPALRLLTLCT
AAGLVVMIGLSIPMAKKARYMLPMLPMAAIIAAYPFQAQGRVFQWLRGLMQGLWLLIPGL
LIVGLLVAKRRFPEHLTSVTAVMTILGVLQVIALGLLFKPRVRAVGLAFTAVLALWSTYI
LVFEPAERRLFDTRTFSRAAFELIQKDPAPVVLHAMGKDAKAIKFMVNVEHDLFPVFTHS
VQELENLKGPAWLVMEKSDYEALKGSRLATLQPVLNGNFDKDDYVLLHLVPVQP