Protein Info for AO353_23695 in Pseudomonas fluorescens FW300-N2E3

Annotation: hypothetical protein

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 100 200 300 400 500 600 700 800 900 1000 1100 1208 signal peptide" amino acids 1 to 19 (19 residues), see Phobius details transmembrane" amino acids 795 to 814 (20 residues), see Phobius details amino acids 826 to 847 (22 residues), see Phobius details amino acids 877 to 896 (20 residues), see Phobius details amino acids 918 to 937 (20 residues), see Phobius details amino acids 970 to 992 (23 residues), see Phobius details PF20249: VasX_N" amino acids 23 to 157 (135 residues), 78.9 bits, see alignment E=2.3e-26

Best Hits

Predicted SEED Role

"FIG00954213: hypothetical protein"

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See A0A0N9X047 at UniProt or InterPro

Protein Sequence (1208 amino acids)

>AO353_23695 hypothetical protein (Pseudomonas fluorescens FW300-N2E3)
MTAAANLAAAAASKTAIGSPGACPLRQTHVQLLPLRYGLVEKLLDPSAELKLPYALTTRP
LGIRMLRDGWLYVIDSVTGYLHEYQVLNGMVSALLHKGAKVTGDRRTPIEELPALVFSRR
STLHVTFAEVQWTVAKCAQVLDSRDEREHFMQVVDLGPVDCQTGGTHLLTVKQGQRWLAE
IATVPAQLAQAVKDRAELEAELAANPLPEAVLLPSVLVSDAPEHEREPYLWENPRRFREA
HIGEFLGQVRGPYQDDTLFLLVNDDLGVLRDLAEYQDTVVGWVDDWSNADHNERDYLLAC
YIESLSQLSPDDAGGLANASDDPAVKALFADLQQLPEPTQERTRKALLEYLNKGGKVEQV
DVPAPPELERLRKEAFAKIFVMGKHQGTAVHRAAIEDADRNYYTRQHFKVAPADFVERHL
RALVKLGREQNTRIEDVLEGSWFSGTRGINDFIDRPAMDNSLFQQRADLGRWNRLLGRIT
ADRTQLVCAGRYHRSAWYYDAQDPQQLGEAFNAEYACLKDICRSDHASEEMLGYLEKHPE
LTRRLFYTLPLRIRPELLVQYSVLSNAGMGLFNNLPHWLEALQKIEQPHLPALDDLPDHT
RAVADATQHSLSPALNLGLSRALEGFDLAAGKVPDLDELFRHLPKALPARILDAAKTTGV
TFTIAIPGEHAALQTDIKDVLRERGYLKDLTVERKQLTHNKNQAGHKQPRAIELQTEIVR
VRAQLTQLEGRLAGALSPIAELPDHSVRTYGATPARAGVTVVFPPAQQQEVRSLLKNVRL
GIQGVPNADLIKSEGVGLLVFLVQAVNLLSTFREMMSQTKDEKKRAVFFAALASTGAAGF
TAAQSLADTALKARSDKLVEALQSHALQNVHVQMGKLHVGLGLFTYGVGLFSSRSSLSTQ
HQNWQQATRSGNRAAQSSAALAAVGAAGMAAVNAYGLGHTLHAGATVLLAKSTAARTAAW
AAAGTRLSTVFFRVNLAGFLFTMLEFGGTWLFNRYNISAHDKWLKTTPWSLDSDERGNYT
LDEYQRYLGDLLHAPSAKLGLNEHDSLLKNLFLRAKPSDIHLKLPGLKLSDFQPPLSGKP
SKRLGIGAHRLFRPLDSRGTARERKDAISDEVLDSLQVVQADPLILCLQYPLNRDAPLTP
VAETLELAVCVQSLNAKGEWISRTHVIHLNPRGEGDFPSLPPKTVTEHPPLLLVETHLLE
FADHAQQP