Protein Info for AO353_22800 in Pseudomonas fluorescens FW300-N2E3

Annotation: sulfite reductase

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 400 450 500 552 PF03460: NIR_SIR_ferr" amino acids 53 to 109 (57 residues), 59 bits, see alignment 3e-20 amino acids 343 to 398 (56 residues), 42.5 bits, see alignment 4.4e-15 PF01077: NIR_SIR" amino acids 119 to 272 (154 residues), 167.7 bits, see alignment E=1.4e-53 amino acids 411 to 547 (137 residues), 55.5 bits, see alignment E=4.8e-19

Best Hits

KEGG orthology group: K00381, sulfite reductase (NADPH) hemoprotein beta-component [EC: 1.8.1.2] (inferred from 96% identity to pfo:Pfl01_3112)

Predicted SEED Role

"Sulfite reductase [NADPH] hemoprotein beta-component (EC 1.8.1.2)" in subsystem Cysteine Biosynthesis (EC 1.8.1.2)

MetaCyc Pathways

KEGG Metabolic Maps

Isozymes

Compare fitness of predicted isozymes for: 1.8.1.2

Use Curated BLAST to search for 1.8.1.2

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See A0A0N9VY43 at UniProt or InterPro

Protein Sequence (552 amino acids)

>AO353_22800 sulfite reductase (Pseudomonas fluorescens FW300-N2E3)
MYVYDEYDQRIIEDRVKQFRDQTRRYLAGELSEEEFRPLRLQNGLYIQRFAPMLRVAVPY
GQLTSRQTRMMAKIARDYDKGYAHISTRQNVQFNWPALEDIPDILAELATVQMHAIQTSG
NCLRNVTTDQFAGVAADELIDPRPWCEIVRQWTTFHPEFAYLPRKFKIAINGSTSDRAAI
EVHDIGLEPVHNAAGELGFRVLVGGGLGRTPVVGAFINEFLPWPDLLSYLDAILRVYNRY
GRRDNKYKARIKILVKALTPEVFAQKVDAEMEYLRGGQTTLTEAEVHRVAKHFVDPDYNV
LNDQTAELAELDKQYPGFARWRTRNTLAHKKPGYVAVTLSLKPTGVAPGDLTDKQLDGVA
DLADRYSFGQLRTSHEQNIILADVEQSQLFTLWGELREQGFATPNIGLLTDIICCPGGDF
CSLANAKSIPIAEAIQRRFDDLDYLFDIGELDLNISGCMNACGHHHVGHIGILGVDKKGE
EFYQVSLGGSASRDASLGKILGPSFAQDDMPDVISKLIDVYVEQRTEDERFIDTYQRIGI
DLFKERVYAANN