Protein Info for AO353_22730 in Pseudomonas fluorescens FW300-N2E3
Annotation: hypothetical protein
These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.
Protein Families and Features
Best Hits
Swiss-Prot: 51% identical to Y1124_NEIMB: Putative lipoprotein NMB1124/NMB1162 (NMB1124) from Neisseria meningitidis serogroup B (strain MC58)
KEGG orthology group: None (inferred from 79% identity to pfs:PFLU0164)Predicted SEED Role
"Phosphonate ABC transporter phosphate-binding periplasmic component (TC 3.A.1.9.1)" in subsystem ABC transporter alkylphosphonate (TC 3.A.1.9.1) (TC 3.A.1.9.1)
Sequence Analysis Tools
PaperBLAST (search for papers about homologs of this protein)
Search CDD (the Conserved Domains Database, which includes COG and superfam)
Predict protein localization: PSORTb (Gram-negative bacteria)
Predict transmembrane helices and signal peptides: Phobius
Check the current SEED with FIGfam search
Find homologs in fast.genomics or the ENIGMA genome browser
See A0A0N7H0P9 at UniProt or InterPro
Protein Sequence (219 amino acids)
>AO353_22730 hypothetical protein (Pseudomonas fluorescens FW300-N2E3) MIARSLKLMAGLLALAVLGGCVSPKTVDYSAYKQSRPKTILVLPPLNNSPDVKASYSMLS QVTYPLAEAGYYVLPIALVDETFHQNGLTTPADIHQAPANKLQEIFGADAALYITVTDYG TRYMVISSATVVTASAKLVDLKTGTTLWTGSASASSEEGNNNSGGGLLGALITAAVKQVI NSSTDAGHPIAGITSARLLSAGHPAGLLYGPRSPMYGTD