Protein Info for AO353_22315 in Pseudomonas fluorescens FW300-N2E3

Annotation: MFS transporter

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 403 signal peptide" amino acids 1 to 28 (28 residues), see Phobius details transmembrane" amino acids 43 to 65 (23 residues), see Phobius details amino acids 77 to 93 (17 residues), see Phobius details amino acids 99 to 124 (26 residues), see Phobius details amino acids 136 to 157 (22 residues), see Phobius details amino acids 168 to 188 (21 residues), see Phobius details amino acids 221 to 243 (23 residues), see Phobius details amino acids 255 to 274 (20 residues), see Phobius details amino acids 283 to 302 (20 residues), see Phobius details amino acids 308 to 331 (24 residues), see Phobius details amino acids 343 to 363 (21 residues), see Phobius details amino acids 369 to 391 (23 residues), see Phobius details PF07690: MFS_1" amino acids 15 to 353 (339 residues), 91.8 bits, see alignment E=2.1e-30

Best Hits

KEGG orthology group: None (inferred from 49% identity to asa:ASA_3608)

Predicted SEED Role

"Putative drug efflux protein"

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See A0A0N9WZI1 at UniProt or InterPro

Protein Sequence (403 amino acids)

>AO353_22315 MFS transporter (Pseudomonas fluorescens FW300-N2E3)
MPVTTHQRNGFLLFLALSLMASLMNSSAPTPLYPFYKEHLLLSAVDLTFIFGAYGAGVLL
SLVTMARVAGRTKDQRTFLIPATVLVLIGAWLFSQGSSLWYLCAARLVAGLGTGTLTASI
NVALKHFGPDDNGKLAALLATLAMVTGLALGPVLSSAALQLDLYPVGLPFWLIMALVVTT
TVGTLALWPRQKKDAAQPKAMQEHPRSLRDAFEGSGPPFHLCAWSVFFSWSFAACVFVIG
PGAAEQQLNLSDRGAFGYGISVYLLIAGASQLLCQRLDARRTLLSGLAAQSVTFLILLAA
FYNHSLMLGAVGLVVGGYAYGAIFVGSARLINQLVPAHSHAKLVSYFYITVYLFNAVPIP
LGLMVDVLGIAQAVTVSLSVFLVIGMGLIVLSTRTAFSRRWPA