Protein Info for AO353_22310 in Pseudomonas fluorescens FW300-N2E3

Annotation: MFS transporter

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 400 450 500 528 transmembrane" amino acids 21 to 43 (23 residues), see Phobius details amino acids 53 to 76 (24 residues), see Phobius details amino acids 85 to 106 (22 residues), see Phobius details amino acids 112 to 135 (24 residues), see Phobius details amino acids 147 to 171 (25 residues), see Phobius details amino acids 177 to 197 (21 residues), see Phobius details amino acids 231 to 252 (22 residues), see Phobius details amino acids 264 to 282 (19 residues), see Phobius details amino acids 289 to 311 (23 residues), see Phobius details amino acids 317 to 338 (22 residues), see Phobius details amino acids 352 to 374 (23 residues), see Phobius details amino acids 380 to 398 (19 residues), see Phobius details PF05977: MFS_3" amino acids 9 to 526 (518 residues), 664.5 bits, see alignment E=1e-203 PF07690: MFS_1" amino acids 23 to 366 (344 residues), 112.5 bits, see alignment E=2.1e-36

Best Hits

KEGG orthology group: None (inferred from 70% identity to avn:Avin_42320)

Predicted SEED Role

"MFS transporter"

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See A0A0N9WLZ0 at UniProt or InterPro

Protein Sequence (528 amino acids)

>AO353_22310 MFS transporter (Pseudomonas fluorescens FW300-N2E3)
MTNEQPPTTSAWQPLRHGLFRSLWLASIASSIGTWMHEVGAGWLMTSLSASPFMVSLVQV
AGAAPMFLLALPAGALADIIDKRRYLLAVQTGMAVIALVLALITLANLMSATLLLLFTLA
MGVGTALTMPAWSALTPELVPASDLPAAISLSSVGVNVARALGPAIAGIIISLVGPWATF
AVNALSFFGVIAVLALWRRTPQPSVLPAERLFGAIRVGWRHARSSRELQRVMVRALAFFL
GASAGMSLLPLIVRGELKGSAEQFGILLGCVGIGAVAGAMFLPAIRRHIAVNLLVASASL
IYATVLLALAWVRDFYLLIPVMLISGAAWIAVLSSLQVSAQTSVPAWVRARALAVYILTF
FGSMAMGGVVWGLIASWLSISISLSFAAVIMVAGVALGRWFKLPTLSAEDLAPSLHWPQP
LLSVDADGERGPVMITVEYEIDTADADAFKEAMEEVRRMRHRNGSFSWQLMQDTENPQRW
IELFFDESWLDHLRHHGRVTRAELKIESAARRFQIAGKPVRIRHLLKG