Protein Info for AO353_22140 in Pseudomonas fluorescens FW300-N2E3

Annotation: hypothetical protein

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 400 459 transmembrane" amino acids 27 to 46 (20 residues), see Phobius details amino acids 66 to 91 (26 residues), see Phobius details amino acids 112 to 132 (21 residues), see Phobius details amino acids 139 to 161 (23 residues), see Phobius details amino acids 263 to 285 (23 residues), see Phobius details amino acids 329 to 350 (22 residues), see Phobius details amino acids 362 to 382 (21 residues), see Phobius details amino acids 401 to 419 (19 residues), see Phobius details amino acids 435 to 455 (21 residues), see Phobius details PF12801: Fer4_5" amino acids 66 to 110 (45 residues), 41.9 bits, see alignment 3.9e-15 amino acids 151 to 185 (35 residues), 23.7 bits, see alignment 1.9e-09

Best Hits

KEGG orthology group: None (inferred from 80% identity to pba:PSEBR_a2686)

Predicted SEED Role

"Ferredoxin" in subsystem Soluble cytochromes and functionally related electron carriers

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See A0A0N9WZG5 at UniProt or InterPro

Protein Sequence (459 amino acids)

>AO353_22140 hypothetical protein (Pseudomonas fluorescens FW300-N2E3)
MPDLSRHNQWLQRLGDGMRRHASVIRAVQWVVVLFYAVLLVTPALLPLPDSQARILDHLT
LLAQFLFWGIWWPFVLLSMVFFGRLWCGVLCPEGSLSEWASHYGKGLGVPRWVRWGGWPT
LAFCLTTLYGQLISVYDYAQAALLILGGSTVAAVIVGLLFARGKRVWCRYLCPVSGVFAL
LARLAPVHFQVDEQRWIENAAPRLPPPNCAPLLDIRRLQGASDCHACGRCSGQRGAVQLI
ARSSNQEILHASAQTLSPWDTRLLLFGVIGLAMGAFQWTVSPWFIALKQHLAQWLVEHNQ
LWALQDNAPWWLLTHYPQLNDSFSWLDGFSIVTYLSLSSIVLGAALTLLLRLTARLARDR
ALYWPLALTLTPLGGAGLFLGLSATTVKLLRYEGLLLEWVQPARACLLLAAMGWSLLLGW
KRLKHENISLVRRGSGGVCLLLANGLIGFGWWLQFWGWA