Protein Info for AO353_21295 in Pseudomonas fluorescens FW300-N2E3

Annotation: hypothetical protein

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 400 465 PF21723: DUF1338_N" amino acids 12 to 193 (182 residues), 203 bits, see alignment E=3.5e-64 PF07063: DUF1338" amino acids 198 to 412 (215 residues), 220.5 bits, see alignment E=1.6e-69

Best Hits

KEGG orthology group: None (inferred from 81% identity to pba:PSEBR_a3739)

MetaCyc: 69% identical to 2-oxoadipate dioxygenase/decarboxylase (Pseudomonas putida KT2440)
RXN-21282 [EC: 1.13.11.93]

Predicted SEED Role

"FIG00960493: hypothetical protein"

MetaCyc Pathways

Isozymes

No predicted isozymes

Use Curated BLAST to search for 1.13.11.93

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See A0A0N9VXG4 at UniProt or InterPro

Protein Sequence (465 amino acids)

>AO353_21295 hypothetical protein (Pseudomonas fluorescens FW300-N2E3)
MSNHNVVSPDLIRQRFSRAMSDMYREEVPLYGALMELVAQTNVQVLDSDPAIARQLRSTG
EIERLDLERHGAIRVGTAQELATLCRLFAVMGMQPVGYYDLTPAGVPVHSTAFRAVHEAS
LQVSPFRVFTSLLRLELIENPELRAFAESVLAKRSIFTAQALKLIEQAEQHGGLDEQQAE
DFVEQALETFRWHHRATVTAAQYQQLSAQHRLIADVVAFKGPHINHLTPRTLDIDIVQAK
MPEYGITPKAVIEGPPRRQCPILLRQTSFKALDEPIAFTDQQQALGSHSARFGEIEQRGA
ALTPEGRALYDRLLNAARDALNDFPNEANAARYHSLMEQHFKAFPDSYNEMREQGLAYFR
YFVTEKGLAADSDELGSASLRGLLDAEYIRAVPLVYEDFLPVSAAGIFQSNLGDAAQTHY
GEHSNRQAFEQALGRSTIDELALYADTQRRSIEECCAALNVPSLS