Protein Info for AO353_21240 in Pseudomonas fluorescens FW300-N2E3

Annotation: undecaprenyl-phosphate glucose phosphotransferase

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 400 473 transmembrane" amino acids 21 to 39 (19 residues), see Phobius details amino acids 45 to 65 (21 residues), see Phobius details amino acids 84 to 102 (19 residues), see Phobius details amino acids 108 to 130 (23 residues), see Phobius details amino acids 290 to 310 (21 residues), see Phobius details amino acids 451 to 468 (18 residues), see Phobius details TIGR03025: exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase" amino acids 27 to 473 (447 residues), 448.7 bits, see alignment E=3e-138 TIGR03023: undecaprenyl-phosphate glucose phosphotransferase" amino acids 35 to 473 (439 residues), 458.1 bits, see alignment E=4.7e-141 PF13727: CoA_binding_3" amino acids 68 to 248 (181 residues), 73.3 bits, see alignment E=2.7e-24 PF02397: Bac_transf" amino acids 284 to 466 (183 residues), 218.2 bits, see alignment E=6.3e-69

Best Hits

KEGG orthology group: K03606, putative colanic acid biosysnthesis UDP-glucose lipid carrier transferase (inferred from 76% identity to ppu:PP_3142)

Predicted SEED Role

"capsular polysaccharide biosynthesis protein" in subsystem Rhamnose containing glycans

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See A0A0N9WC34 at UniProt or InterPro

Protein Sequence (473 amino acids)

>AO353_21240 undecaprenyl-phosphate glucose phosphotransferase (Pseudomonas fluorescens FW300-N2E3)
MIFEPSSSRSILQRRSSTSNAIQAGLDFVAVIGVAWYLIDYHIGVITQAYVIMLLLLLGA
LAVVYDHYAIYRSNVGFTVKAFKLLKAWLAAFGFLVVMAFLTKQSEQYSRLLVAQLFIVG
YFAQLLLHLATLEVQKKLLTHPNHLETALIIGSGELASFLHQKISNNPWLGERVVGCVLI
GSRDVRGKEGSESTQRLSILGNISDLDKLIVRHSIRTVYFVTPLDGSEVIKDVYLKLLDK
HIAINWVPDIFSLRLINHSVREIAGIPVLTLSETPLMGMRLFLKNVEDKVLAFLILLLAA
PLLVAIAIAIKVDSPGPVFFRQERMGWSGVFRIWKFRSMVVHQPEDGIVKQAEKNDPRMT
RVGAFIRRTSLDELPQLFNVLMGEMSLVGPRPHAIQHDAQYSPGIADYFARHNIKPGITG
LAQVRGFRGETKDIEQMIQRVESDIEYINNWSLWLDFVILLRTLFAFSGKRAY