Protein Info for AO353_20845 in Pseudomonas fluorescens FW300-N2E3
Updated annotation (from data): uridine/adenosine nucleosidase (EC 3.2.2.3; EC 3.2.2.7)
Rationale: Important on adenosine and uridine; annotated by SEED as for uridine and inosine; fitness defect on uridine is subtle but is confirmed by observations for close homologs (SEED_correct)
Original annotation: nucleoside hydrolase
These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.
Protein Families and Features
Best Hits
KEGG orthology group: K01239, purine nucleosidase [EC: 3.2.2.1] (inferred from 93% identity to pfo:Pfl01_1925)Predicted SEED Role
"Inosine-uridine preferring nucleoside hydrolase (EC 3.2.2.1)" in subsystem Purine conversions or Queuosine-Archaeosine Biosynthesis (EC 3.2.2.1)
MetaCyc Pathways
- purine nucleotides degradation I (plants) (10/12 steps found)
- adenosine nucleotides degradation I (7/8 steps found)
- guanosine nucleotides degradation II (4/4 steps found)
- superpathway of purines degradation in plants (14/18 steps found)
- superpathway of guanosine nucleotides degradation (plants) (5/6 steps found)
- adenine and adenosine salvage II (2/2 steps found)
- guanine and guanosine salvage II (2/2 steps found)
- pyrimidine ribonucleosides salvage III (2/2 steps found)
- guanosine nucleotides degradation I (3/4 steps found)
- superpathway of pyrimidine ribonucleosides salvage (7/10 steps found)
- pyrimidine ribonucleosides salvage II (1/2 steps found)
- NAD salvage (plants) (6/11 steps found)
KEGG Metabolic Maps
Isozymes
No predicted isozymesUse Curated BLAST to search for 3.2.2.1 or 3.2.2.3 or 3.2.2.7
Sequence Analysis Tools
PaperBLAST (search for papers about homologs of this protein)
Search CDD (the Conserved Domains Database, which includes COG and superfam)
Predict protein localization: PSORTb (Gram-negative bacteria)
Predict transmembrane helices and signal peptides: Phobius
Check the current SEED with FIGfam search
Find homologs in fast.genomics or the ENIGMA genome browser
See A0A0N9WN92 at UniProt or InterPro
Protein Sequence (342 amino acids)
>AO353_20845 uridine/adenosine nucleosidase (EC 3.2.2.3; EC 3.2.2.7) (Pseudomonas fluorescens FW300-N2E3) MYRYAQRLHHLIRSLLLLSLLTATGAHAAEKIDLIIDTDPGADDVVALLFALASPEELNI RALTTVAGNVRLDKTSRNARLAREWAGREDVPVYAGAPKPLMRTPIYAENIHGKEGLSGV TVHEPKKGLAKGDAVSYLIDTLRAAKPHSITIAMLGPQTNLALALIQDPEITQGIKEVVI MGGAHFNGGNITPVAEFNLFADPHAAEVVLKSGVKLTYLPLDVTHKILTSDARLKQIAAL NNNASKLVGDILNEYVKGDMEHYGIPGGPVHDATVIAYLLKPELFTGRAVNVVVDSREGP TFGQTVVDWYDGLKAPKNAFWVANGDAQGFFDLLTARLARLK