Protein Info for AO353_19730 in Pseudomonas fluorescens FW300-N2E3

Annotation: filamentous hemagglutinin

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 100 200 300 400 500 600 700 800 900 1000 1100 1200 1300 1400 1500 1592 signal peptide" amino acids 1 to 35 (35 residues), see Phobius details PF05860: TPS" amino acids 47 to 296 (250 residues), 158.3 bits, see alignment E=3.5e-50 TIGR01901: filamentous hemagglutinin family N-terminal domain" amino acids 70 to 162 (93 residues), 49.4 bits, see alignment 1.6e-17 PF13332: Fil_haemagg_2" amino acids 197 to 355 (159 residues), 20.1 bits, see alignment E=5.8e-08 amino acids 379 to 440 (62 residues), 19 bits, see alignment (E = 1.3e-07) amino acids 454 to 595 (142 residues), 37.7 bits, see alignment E=2.3e-13 amino acids 602 to 763 (162 residues), 48.5 bits, see alignment E=1.1e-16 amino acids 788 to 872 (85 residues), 25.7 bits, see alignment 1.1e-09 amino acids 908 to 1069 (162 residues), 39.4 bits, see alignment E=6.9e-14 amino acids 999 to 1171 (173 residues), 46.5 bits, see alignment E=4.5e-16 amino acids 1135 to 1263 (129 residues), 21.4 bits, see alignment E=2.4e-08 amino acids 1203 to 1361 (159 residues), 61.4 bits, see alignment E=1.2e-20

Best Hits

KEGG orthology group: K11016, hemolysin (inferred from 67% identity to pfl:PFL_4237)

Predicted SEED Role

No annotation

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See A0A0N9WYB2 at UniProt or InterPro

Protein Sequence (1592 amino acids)

>AO353_19730 filamentous hemagglutinin (Pseudomonas fluorescens FW300-N2E3)
MPIEKFAFHLSPRGKLRWAIASLFLVAQLPQAFAGGLTVAPGPGGTPQLQNQAGVPIVNI
VAPNGAGLSHNQFLDYNVDRQGLVLNNALQAGQSQLAGQLAANPQFQGQAASVILNEVIS
RNASAVNGAQEIFGRPADYVLANPNGISVNGGSFINTPNANLVVGRPELNDGKLQGLNTR
DATGQLQIQGQGLTNREGSINLIAPRIDSQGRIDARDQLNLTAGRNQLDYPSGQVRSVDP
AGATQDSRIDASLFGAMQAGRINIVSTAEGAGVRVGPVQVEGHDGVKIQSAGDLQISGQA
LPNSLDVTRSAVRSSQGDVALRGDKDLTLAAADVSGRNVKLDAGRNLTLSSVEARKLQEK
RENWNNNTIGITWETYDRTQTDSDSRQHGSQVVASHTAELKAGASTELKAAKVEAGETLK
VDSGADLRLTAAIETRTQTDQGKHRKHLWKADWNNSSEEQRSVTSQLKAGKNIAISSGEL
LSSQGAELSSKGDIHLAGKQVEIGSASRTQRSSKNGYSGDLVGGGFFGKTGDADQGKTLN
QGSKINADGKLIVKADDVRISGSQVRGRTEASVISDKGSLTIDGVQNTSHSNSHDKDSKF
FGIAKDESRQNLKGSTTVSSQLSSDSNLALKSAKDIDVVGATVSAGGSLSADATGTLTVS
SAQDTSDSSTSSQNRGFDAYARENAPGAGQYRAGIHYEDKQQTTTANDTRQQGSSLTGAN
VQLAAGGDLILNGAKVKASAGDVSLSGQNVALLAEHDSTSSTTDTTRNAGGFYYTGGLDR
AGSGVDFAHGSSQDNTAKTTARTTGVESSGKLQINAGNGTLTTQGAQVAAGSTLQVTAGR
VDNQAADNTDSSSHKENNWSVDVGANVEYKGIARPVAKAIEGVAQSKVQQPGLLDNLTQP
NVGIDVEVGHSNNSRSEQNSNAVVSQFKGGAVGVQVAGELKDQGSQYRATDGALTIKADS
QVATAAANTHSSSEQSVDAKVGVRVYTTTGEDVNVRGSGAGGSRQTSETSSKAVVGSYAG
NQGVKIDLRGDGQYEGSQFNGGQGGVAIKTGGNLALNQANDHQSGNTSSLRGDGSLTVGT
NPGAEGSNVNLGAGFQLDHKANQTDDSQARVASIQGKGPVQLSSGGDQVLQGATIGTVVN
KATDISLNSGGKLDLQAATDTHSANGSNLGGGLNLGGGKSSTEKSSGLNGNLSANFNIGR
VGENSQSLKGGSLNSQGPVLLSSGSSAADAIHLQGTQVSAPSVTLDAQQGGIYLESTQST
QAINNWGLTLGAGGNASKSTPSATNDQDVAKSGHGFDARAKIDVDNRNGTTQKNSHIQAD
SVVLNSAGDTRLAGARIDAKQVSGQVGGDLTLESRQDHESSVKVGIDLRLNAEKNQPGAV
GKLAKTTGPLKDKVEGKAQEAFDSHRDKLETAVDKSVEGLASAKDSLTRSGSYSLNAKDS
AGSKVADATQSALFGDKSGATSYTPTLYLDVSHTSKNSVTQASGISGSQGVDLRVGGETQ
LTGARISAKEGSVDLGGSRVTSTSLSGSDYRADVGLNLSKSAVNLATGAKDELTQTPDAA
TAKDRKFNLGPLSAGGHYETQVLQAGIDEKSL