Protein Info for AO353_19690 in Pseudomonas fluorescens FW300-N2E3

Annotation: hypothetical protein

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 100 200 300 400 500 600 700 800 900 1000 1100 1227 signal peptide" amino acids 1 to 20 (20 residues), see Phobius details PF13646: HEAT_2" amino acids 603 to 662 (60 residues), 37.7 bits, see alignment 3.2e-13 PF03130: HEAT_PBS" amino acids 616 to 641 (26 residues), 18.7 bits, see alignment (E = 2.9e-07) PF13569: DUF4132" amino acids 951 to 1135 (185 residues), 155.7 bits, see alignment E=2e-49

Best Hits

Predicted SEED Role

No annotation

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See A0A0N9VRW7 at UniProt or InterPro

Protein Sequence (1227 amino acids)

>AO353_19690 hypothetical protein (Pseudomonas fluorescens FW300-N2E3)
MLKWIGKVLGGASATPAAAASNVPGDVWLQRLQTYLEPLDHLPDNGGRAGLAEAILTYVR
QGDGPQVLAELGQRYAVANYLHILSGHECRVGSLGPQLYHDLTDVDPAQLLRWARVLQAC
PARRFGIAMADGSHWPELLLTHSVELLRDPQTDETRIVQRISAPLMETLLLEAHLPPSAL
LTACFSGSNDAYRQGYGIYLVPYMDGYSQWVLRHVEALRPLLLAGDMYLKHQVLNLMSDL
DPPVMTAMAGELCEMACGGNREVREQAAPLLLKCQRGALQPLTLMIQGGKPEQRAHALRL
LWALANQLADPPLRAEARALAEADRAASVRGLLAEWDAEPAHEQGPVHYSGPVIDWAVVL
TPERLEVVDQLWADLNHLIDRDNESNIEYYATHPEKKTAGKPELWPNYSVAALNQLKAFL
ASTEVVPPASRDLPQDHSEYFSRSAMQAFADSEELTGVMAFKVLDFCNALGSGEGCLSNI
SCRALEQAYQQDDSLSLMALAQMLEDRGRNGDSLLQDCFNGGFAEDWDADAVAPYFALHQ
GWLEQALAALEVYRTDALYAAVVKMAPPPASLINRLFEIALGSNQGERAQAQRALEQLPG
KEAHLIAALGSGKSEVRLLATKWLGNLGHQPAIPALEQALKKDKNDGVRTAMIEALEQMG
QPVEQYLDREQWVIDTSKAMAKGAPKDLAWFPWDALPELRWADTQEPVPAPAAQGLLAQA
VKLKSAQPGALLRRFCGMFEARGRERFGQFVLDTWLAEDTRPIPLEQAQQLAERHATSTL
FFIQRYPDDYKDSPHLGKSLDELSASFLPRFMRQPQGSAAASKGLLAVAAACAGADAAAP
AGRYLKEFYGTRASQGKALIAMLAWIEHPSATQLLLSIASRFRTAGFQEEAILQARALAE
RNHWTLAQLADRTLPSAGFDEHGLLELSYGERLFSARLLADFKIELYNPDGKKIAALPDP
RQDDDADEAKEAKKQFASAKKSLASIVKQQTERLYEALCTGREWPYADWQRYLNQHPIMR
RLLQRLVWVQVEGDRVLASFRPLDDGSLTDCEDNPLTLADDAQVRLAHDSLLGAEELLQW
QQHLADYEVTPLFQQLGKGVYQLPEGQGDAHSIEDFKGHLLEAFALRGHALKLGYTRGAT
EDAGWFYTYEKSFVSLGLSADIRFTGNPLPESNRTVALVDLTFYRGRYSMPLAEVPTILL
SECYHDLRSIAAQGTGFDPDWEKKSEY