Protein Info for AO353_19485 in Pseudomonas fluorescens FW300-N2E3

Annotation: aldolase

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 251 PF00596: Aldolase_II" amino acids 16 to 198 (183 residues), 161.5 bits, see alignment E=1e-51

Best Hits

KEGG orthology group: None (inferred from 88% identity to pfo:Pfl01_3900)

Predicted SEED Role

"Ribulose-5-phosphate 4-epimerase and related epimerases and aldolases"

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See A0A0N9WKN6 at UniProt or InterPro

Protein Sequence (251 amino acids)

>AO353_19485 aldolase (Pseudomonas fluorescens FW300-N2E3)
VNKPEHMNTIEWQARCELAALYRLVAHFRMTDLIDTHITLRIPGPEHHFLINRYGVIFDR
MRASDLVRIDQQGRIVDPAYADHRVNTAGFVIHSAIHMARSDLNCVIHTHTAAGMAVAAQ
KRGLLPITQHALKFYGKLAYHTYEGIALSLDERERLIVDLGPHKAMILRNHGLLVGGASV
AHAFQEIYFLERACQAQVQALAGGCELNFPSPEVCVHTAEQFEQDDAENIIELAWSAALT
LIESQRESYCS