Protein Info for AO353_18910 in Pseudomonas fluorescens FW300-N2E3

Annotation: ethanolamine permease

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 400 454 transmembrane" amino acids 12 to 30 (19 residues), see Phobius details amino acids 36 to 60 (25 residues), see Phobius details amino acids 87 to 112 (26 residues), see Phobius details amino acids 124 to 143 (20 residues), see Phobius details amino acids 149 to 170 (22 residues), see Phobius details amino acids 186 to 207 (22 residues), see Phobius details amino acids 227 to 247 (21 residues), see Phobius details amino acids 276 to 299 (24 residues), see Phobius details amino acids 328 to 346 (19 residues), see Phobius details amino acids 353 to 375 (23 residues), see Phobius details amino acids 395 to 413 (19 residues), see Phobius details amino acids 419 to 436 (18 residues), see Phobius details TIGR00908: ethanolamine permease" amino acids 2 to 448 (447 residues), 619.2 bits, see alignment E=2.1e-190 PF13520: AA_permease_2" amino acids 9 to 414 (406 residues), 146.1 bits, see alignment E=1.5e-46 PF00324: AA_permease" amino acids 17 to 420 (404 residues), 123.4 bits, see alignment E=1.1e-39

Best Hits

KEGG orthology group: None (inferred from 96% identity to pba:PSEBR_a1585)

Predicted SEED Role

"Ethanolamine permease" in subsystem Ethanolamine utilization

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See A0A0N9WIJ6 at UniProt or InterPro

Protein Sequence (454 amino acids)

>AO353_18910 ethanolamine permease (Pseudomonas fluorescens FW300-N2E3)
MNTQLKPTLGTLHLWGIAVGLVISGEYFGWSYGWGVAGTLGFLVTSFMVATMYTCFIFSF
TELTTAIPHAGGPFAYSRRAFGEKGGLIAGLATLIEFVFAPPAIALAIGSYLNVQFPALD
PKHAAVGAYIVFMGLNILGVKLAATFELVVCVLAVIELLVFMGVVAPAFSFSNFALNGWA
GSDAFGAPAIAGMFAAIPFAIWFFLAIEGAAMAAEEAKDPKRTIPKAYISGILTLVLLAM
GVMFFAGGVGDWRTLANINDPLPQAMKAVVGESSGWLHMLVWIGLFGLVASFHGIILGYS
RQFFALARAGYLPAYLAKLSRFQTPHRAIIAGGLIGIAAIYSDGLINLGGMTLTAAMITM
AVFGAIVMYIMSMLSLFKLRKTEPNLERTFRAPGYPLVPATALALAVVCLVAMAWFNALI
GAIFLGFMAVGFVYFLRTAQLRADAPADAMLTGL