Protein Info for AO353_18565 in Pseudomonas fluorescens FW300-N2E3

Annotation: MFS transporter

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 399 transmembrane" amino acids 12 to 34 (23 residues), see Phobius details amino acids 44 to 63 (20 residues), see Phobius details amino acids 80 to 101 (22 residues), see Phobius details amino acids 107 to 134 (28 residues), see Phobius details amino acids 147 to 168 (22 residues), see Phobius details amino acids 174 to 194 (21 residues), see Phobius details amino acids 215 to 241 (27 residues), see Phobius details amino acids 247 to 266 (20 residues), see Phobius details amino acids 278 to 296 (19 residues), see Phobius details amino acids 302 to 325 (24 residues), see Phobius details amino acids 336 to 359 (24 residues), see Phobius details amino acids 364 to 386 (23 residues), see Phobius details PF07690: MFS_1" amino acids 18 to 346 (329 residues), 92.6 bits, see alignment E=1.2e-30 amino acids 221 to 394 (174 residues), 56.3 bits, see alignment E=1.3e-19

Best Hits

Swiss-Prot: 77% identical to Y3873_PSEAB: Uncharacterized MFS-type transporter PA14_38730 (PA14_38730) from Pseudomonas aeruginosa (strain UCBPP-PA14)

KEGG orthology group: None (inferred from 94% identity to pfo:Pfl01_1495)

Predicted SEED Role

"Xanthine transporter,putative" in subsystem Purine Utilization

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See A0A0N9WL50 at UniProt or InterPro

Protein Sequence (399 amino acids)

>AO353_18565 MFS transporter (Pseudomonas fluorescens FW300-N2E3)
MPDPQRPMAVTLQVVSIVLFTFIGYLNIGIPLAVLPGYVHSDLGFGAVIAGLVISVQYLA
TLLSRPYAGRIIDNQGSKRAVMIGLAGCGLSGVFMLLSAWTQNLPTLSLISLLIGRLVLG
SAESLVGSGSIGWGIGRVGAANTAKVISWNGIASYGALAVGAPLGVLLVHHLGLWSMGVS
ILLLAALGLLLAWPKTAAPIVAGERLPFMHVLGRVLPHGCGLALGSIGFGTIATFITLYY
ATRHWDNAVLCLSLFGACFIGARLLFGNLINRLGGFRVAIACLSVETLGLLLLWLAPDAH
WALAGAALSGFGFSLVFPALGVEAVNLVPASSRGAAVGAYSLFIDLSLGITGPLAGAIAA
GFGFASIFLFAALAALSGLMLSFYLYRQSPKYREEREVP