Protein Info for AO353_18085 in Pseudomonas fluorescens FW300-N2E3
Annotation: oxidase
These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.
Protein Families and Features
Best Hits
KEGG orthology group: K07147, (no description) (inferred from 67% identity to pna:Pnap_2692)MetaCyc: 60% identical to sulfite:cytochrome c oxidoreductase molybdenum subunit (Starkeya novella)
Sulfite dehydrogenase. [EC: 1.8.2.1]
Predicted SEED Role
"Twin-arginine translocation pathway signal"
MetaCyc Pathways
- superpathway of sulfide oxidation (Starkeya novella) (4/5 steps found)
- sulfite oxidation I (1/1 steps found)
- superpathway of sulfide oxidation (Acidithiobacillus ferrooxidans) (7/10 steps found)
- superpathway of sulfur metabolism (Desulfocapsa sulfoexigens) (2/6 steps found)
- superpathway of sulfur oxidation (Acidianus ambivalens) (1/9 steps found)
KEGG Metabolic Maps
Isozymes
No predicted isozymesUse Curated BLAST to search for 1.8.2.1
Sequence Analysis Tools
PaperBLAST (search for papers about homologs of this protein)
Search CDD (the Conserved Domains Database, which includes COG and superfam)
Predict protein localization: PSORTb (Gram-negative bacteria)
Predict transmembrane helices and signal peptides: Phobius
Check the current SEED with FIGfam search
Find homologs in fast.genomics or the ENIGMA genome browser
See A0A0N9VWQ2 at UniProt or InterPro
Protein Sequence (409 amino acids)
>AO353_18085 oxidase (Pseudomonas fluorescens FW300-N2E3) MSIDNRNTIKRRVFLQGASLVAAGLAFKPLHSRAAETEAQDFSNGTRELVAYPQKRPLMR VTARPPHLETPFSVFNESILTPNDAFFVRYHLANLPTSIDADNYQLQIKGLVDKPLSLSL AELKALGKTVEVVAVNQCSGNSRGYGSPRVFGAQLGNGSVGNARWTGIPLKAVLEQAGVQ AGAKQVTFRGLDHPVLPTTPEFIKALGIDLALSDEPMIAWAMNGTDIPFLNGYPIKLIVP GYFGTYWVKHLSEIEVIDHTFEGYFMEKAYRVPDNDCQCVPPGTVPDKTRPIGRLKVRSF ITSLQPGAKVKLNEPITLKGFAFDGGHGIQSVELSEDGGRNWQLAVLGENLGNYSFREWT LQWVPREKGKVGLQVRATNGQGEQQPVRALWNPAIYVKNNIETTPITVV