Protein Info for AO353_16075 in Pseudomonas fluorescens FW300-N2E3

Annotation: adhesin

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 161 signal peptide" amino acids 1 to 24 (24 residues), see Phobius details PF04449: Fimbrial_CS1" amino acids 29 to 142 (114 residues), 26.3 bits, see alignment E=3.5e-10

Best Hits

KEGG orthology group: None (inferred from 53% identity to pba:PSEBR_a4526)

Predicted SEED Role

No annotation

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See A0A0N9WJ72 at UniProt or InterPro

Protein Sequence (161 amino acids)

>AO353_16075 adhesin (Pseudomonas fluorescens FW300-N2E3)
MFKKFAVAVPMTLLALSSSMAFAAEEIRSSINISANIPTYDFYAQPVNPDFGKDEKMAWN
VITESLAPLRAAYDIRNTLGSVHAYVEGGPQHLNNGHTAIQLTYAFNGVTLTGMPKEVVS
DAASNGGMRADLVITAALPGNNQVGFYTANPVVIFDAVPRI