Protein Info for AO353_15400 in Pseudomonas fluorescens FW300-N2E3

Annotation: acriflavine resistance protein B

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 100 200 300 400 500 600 700 800 900 1031 transmembrane" amino acids 12 to 33 (22 residues), see Phobius details amino acids 339 to 357 (19 residues), see Phobius details amino acids 364 to 385 (22 residues), see Phobius details amino acids 391 to 414 (24 residues), see Phobius details amino acids 435 to 455 (21 residues), see Phobius details amino acids 467 to 493 (27 residues), see Phobius details amino acids 528 to 547 (20 residues), see Phobius details amino acids 859 to 877 (19 residues), see Phobius details amino acids 884 to 904 (21 residues), see Phobius details amino acids 910 to 934 (25 residues), see Phobius details amino acids 959 to 978 (20 residues), see Phobius details amino acids 988 to 1014 (27 residues), see Phobius details PF00873: ACR_tran" amino acids 8 to 1014 (1007 residues), 991.4 bits, see alignment E=6.9e-302 PF03176: MMPL" amino acids 301 to 497 (197 residues), 32.4 bits, see alignment E=7.3e-12

Best Hits

KEGG orthology group: K03296, hydrophobic/amphiphilic exporter-1 (mainly G- bacteria), HAE1 family (inferred from 91% identity to pfl:PFL_5049)

Predicted SEED Role

"Cobalt-zinc-cadmium resistance protein CzcA; Cation efflux system protein CusA"

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See A0A0N9VQJ4 at UniProt or InterPro

Protein Sequence (1031 amino acids)

>AO353_15400 acriflavine resistance protein B (Pseudomonas fluorescens FW300-N2E3)
MKVHGGISAWCIDHPVATALLTFALVLLGLIAFPRLPVAPLPEAEFPTIQVAAQLPGASP
DTMASSVATPLEVQFSAIPGMTQMTSSSALGSTNLTLQFTLNKSIDTAAQEVQAAINTAA
GKLPKDMPTLPTWRKVNPSDSPVLILSVSSTQMPGTELSDYAETLLARQLSQIDGVGQIY
ITGQQRPAIRVQASADKLAAIGLTLADVRLAIQKTSLNLAKGALYGESSISTLSTNDQLF
HPDEYGQLIVSYKNGAPVQLRDIATVVSGSEDAYVQAWSGDRPGVNLVILRQPGANIVDT
VDRIQAALPGLQAMLPASIQVNVLIDRTQTIRASLHEVEVTLLIAVLLVVAVMALFLRQW
SATLIVSSVLGVSLIASIALMYIMGFSLNNLTLVAIVISVGFVVDDAIVVVENIHRHLEA
GDGMREAAIKGAGEIGFTVVSISFSLVAAFIPLLFMGGVVGRLFKEFALTATSTIMISVV
VSLTLAPTMAALFMRAPVHDAHAKPGFGERLLALYERALRRALAHQKLMLGIFSLTLCMA
VAGYVFIPKGFFPIQDTGFILGTTEAAADVSFPEMVKKHQALADIVAADPAVQTFSHSVG
VSGSNQTIANGRFWISLKKRGDRDVSASAFIDRIRPQLLKVPGIVLYLRAGQDINLSSGP
SRAQYQYVLKSNDGPTLNLWTQRLTEKLRSIPAFRDISNDLQLGGSITHIHIDRAAAARF
GLTASDVDEALYDAFGQRQVNEFQTEINQYNVILELDTRQRGKAESLAYFYLRSPLSGEM
VPLSALARFDAPTIGPLSIAHDGMFPAANLSFNLAPGVALGDAVILLNQAKNDIGMPASV
NGNFQGAAQAFQSSLASQPWLILAALVAVYIILGVLYESFVHPLTIISTLPSAGLGALIL
LWILGQDFSIMALIGLVLLIGIVKKNGILMIDFALDAQRNRGLSPQEAIFEACLTRFRPI
MMTTLAALLGALPLMLGYGTGAELRQPLGIAVVGGLLVSQALTLFTTPVIYLWLERVFHR
STPAPALATTH