Protein Info for AO353_15145 in Pseudomonas fluorescens FW300-N2E3

Annotation: hypothetical protein

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 400 transmembrane" amino acids 12 to 32 (21 residues), see Phobius details amino acids 41 to 63 (23 residues), see Phobius details amino acids 75 to 94 (20 residues), see Phobius details amino acids 101 to 122 (22 residues), see Phobius details amino acids 131 to 154 (24 residues), see Phobius details amino acids 166 to 188 (23 residues), see Phobius details amino acids 209 to 232 (24 residues), see Phobius details amino acids 243 to 266 (24 residues), see Phobius details amino acids 273 to 294 (22 residues), see Phobius details amino acids 299 to 325 (27 residues), see Phobius details amino acids 337 to 360 (24 residues), see Phobius details amino acids 366 to 385 (20 residues), see Phobius details PF07690: MFS_1" amino acids 18 to 274 (257 residues), 77.2 bits, see alignment E=1.2e-25 PF00083: Sugar_tr" amino acids 44 to 154 (111 residues), 24.4 bits, see alignment E=1.3e-09

Best Hits

KEGG orthology group: None (inferred from 39% identity to scb:SCAB_86831)

Predicted SEED Role

No annotation

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See A0A0N7H074 at UniProt or InterPro

Protein Sequence (400 amino acids)

>AO353_15145 hypothetical protein (Pseudomonas fluorescens FW300-N2E3)
MRVPTQFRRAAWLSTYLLLVVMMVGTLPTPLYPLYATQLGLSPFVVTLVFASYALAILFK
LMVFGRLSDLLGRRAVLGLGLGLTFASLLSFLLWPTLAGLFVGRILSGMAVGLMVGATTA
YLSELLSNRSLAALISSLSNMSGLGLGALLSGWVAESAAQPLHASYIALLFMLLPGLLLP
WLPETVIYGGTRPPLRLQRLRIPSEMRQAFMAVAMSVLCGFSFLGLFAALAGRFLAIGLH
HSGLLLSGGIVFLTFCSAAIGQLLVLRLSPRRVVPVGVWLLPLALACVWLAFHFASLSLF
LGGAVLGGMGAGMVLRAGLGLVTMLSPADRIAEVSSGFFVAAYLGLIVPVVGVGLLLSVW
DMSSTIGLFGALVTILVIFSSRAVLGLGPAPGLPIAVGGE