Protein Info for AO353_13975 in Pseudomonas fluorescens FW300-N2E3

Annotation: hypothetical protein

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 184 signal peptide" amino acids 1 to 19 (19 residues), see Phobius details PF13637: Ank_4" amino acids 39 to 88 (50 residues), 32.3 bits, see alignment E=2.4e-11 PF12796: Ank_2" amino acids 41 to 130 (90 residues), 51 bits, see alignment E=4.5e-17 amino acids 76 to 164 (89 residues), 47.1 bits, see alignment E=7.3e-16 PF13857: Ank_5" amino acids 60 to 105 (46 residues), 29 bits, see alignment E=2.8e-10 PF00023: Ank" amino acids 68 to 98 (31 residues), 22.6 bits, see alignment 2.5e-08 amino acids 101 to 131 (31 residues), 16.8 bits, see alignment 1.7e-06

Best Hits

KEGG orthology group: K06867, (no description) (inferred from 77% identity to pfl:PFL_5357)

Predicted SEED Role

"FOG: Ankyrin repeat"

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See A0A0N7H048 at UniProt or InterPro

Protein Sequence (184 amino acids)

>AO353_13975 hypothetical protein (Pseudomonas fluorescens FW300-N2E3)
MRMYLCLFLASLACSVYAEPGADLTKDPAALKAQLQDYYFDAARRGDVPMLETFIEAGYS
LDTRDSKGYTALILAAYHGQSAAVERLLGAGANACAQDLRGNTALMGAIFKGEVQIARRL
LATDCNPEQRNGAGQTAAMYAGLFKRVELLDALAAKGADLNAEDPLGNSAARLAAGEIRT
PAPR