Protein Info for AO353_13805 in Pseudomonas fluorescens FW300-N2E3

Annotation: hypothetical protein

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 400 445 transmembrane" amino acids 376 to 393 (18 residues), see Phobius details amino acids 400 to 422 (23 residues), see Phobius details

Best Hits

Predicted SEED Role

No annotation

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See A0A0N9VUP8 at UniProt or InterPro

Protein Sequence (445 amino acids)

>AO353_13805 hypothetical protein (Pseudomonas fluorescens FW300-N2E3)
MTKLIPKSQLASQRGQVLDSSQAAYNLRQALSSPDNLQGFDDLLRAVGVHRSNYMQATHQ
KKLIDAVSSGDWLMVVPRVAADNGGASWNAFKPKPEPPPAQHLVEDHAFTLPQPVESGFH
IIQRPMSLETLERSLYENSPSDALRKVFRSLNRHLGEQVKPGQMVIFSDSRHYLCRREEA
QMMIAAEKTNEALKDLSDEEAAFMVEHHEVIEPFLGVASGALGVASFMVGQHLETLRNTL
TELERLHQEQYRQYGHLKSPVFFAQRKRLMAKLDASLGPMMRKTTGIPDHPKLKRALGLS
TRRTVHHWSKAGAPTQLPGYATHIEGVARASKYMKAGGYVAIGLGASSAAMKIHETCRAG
RVEECRQVKFVEGGRLLGNVAGGAVASAIGVTVAEGTCLAIGAGTYGVGGMVCMLVVSGM
LASQMGDSGGQAGEYFGEKLYEVTE