Protein Info for AO353_13565 in Pseudomonas fluorescens FW300-N2E3

Annotation: peptidase

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 400 460 transmembrane" amino acids 15 to 39 (25 residues), see Phobius details amino acids 144 to 164 (21 residues), see Phobius details amino acids 192 to 215 (24 residues), see Phobius details amino acids 373 to 394 (22 residues), see Phobius details amino acids 414 to 441 (28 residues), see Phobius details PF03929: PepSY_TM" amino acids 13 to 396 (384 residues), 246.6 bits, see alignment E=7.4e-77 PF03413: PepSY" amino acids 285 to 342 (58 residues), 17.9 bits, see alignment 4.9e-07

Best Hits

KEGG orthology group: None (inferred from 86% identity to pfo:Pfl01_0595)

Predicted SEED Role

"Uncharacterized iron-regulated membrane protein; Iron-uptake factor PiuB"

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See A0A0N9WK44 at UniProt or InterPro

Protein Sequence (460 amino acids)

>AO353_13565 peptidase (Pseudomonas fluorescens FW300-N2E3)
MNQPKPNFYNLAWRWHFYAGLFVAPFMVMLALTGIVYLFKPQLDPLMYGSLLNVPGGHHT
VSADELLRRVKEAYPQGQIKQYLPPVNAERSAQFVVKNAGGELNVFIDPYHADILGEQDA
KKNLQAIARAIHGELMIGTVGDRLVELAAGWGVVLVVSGVFLWWPRGRTGAGIVWPRFSS
RGRVLWRDLHAVTGFWGAAFLLVMLLSGMTWTGFWGKQYAEVWNRFPAAMWNNVPKSDQE
ARSLNTATRQTVPWAMENTPMPMSGDHAEHMAHNGDSSAPAAPTISLQDVQDIAVQRQVE
PGYSITFPTTASGVFTIAVFADDPRNDATLHVDQYSGEVLADVRWQHYGNVARATEMGVM
LHEGKLFGPFNQIVVLLICLMILLSAVSGVVIWWKRHPQGKLGVPPLRHDLPTWKTGVVI
ILALAVIFPLVGASLIVVWLLDRVLLSRLNRQPESASSSS