Protein Info for AO353_13425 in Pseudomonas fluorescens FW300-N2E3

Annotation: hypothetical protein

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 400 450 500 550 600 650 689 transmembrane" amino acids 7 to 29 (23 residues), see Phobius details amino acids 639 to 661 (23 residues), see Phobius details PF05170: AsmA" amino acids 1 to 575 (575 residues), 497.3 bits, see alignment E=8.3e-153 PF13502: AsmA_2" amino acids 432 to 604 (173 residues), 57.3 bits, see alignment E=1.8e-19

Best Hits

KEGG orthology group: K07290, hypothetical protein (inferred from 87% identity to pfo:Pfl01_0566)

Predicted SEED Role

"exported protein, conserved"

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See A0A0N9WVD0 at UniProt or InterPro

Protein Sequence (689 amino acids)

>AO353_13425 hypothetical protein (Pseudomonas fluorescens FW300-N2E3)
MTRTRKILAWVVGSLVLLMAVLVLIIAFFDWNRIKPPLNSKVSEELHRPFAINGNLTVAW
KREVDEGGWRAWVPWPHVMAEDLSLGNPDWSKKPQMVSLKRVELRISPLALLAQRVVIPR
IDLTEPNADLQRLADGRANWTFKFDPKDPNAEPSRWVVDIGAIGFDKGHVTLDDQTLNTQ
LDLLIDLLGKPIPFSDIVGDKAAKKALEKGSALQDYVFALKVKGQYHGQKLAGEGKVGGL
LALQDAAKPFPLHAQVKIADTSVELAGTLTDPLNLGALDLRLKLAGTSLGNLYPLTGVPL
PASPPYTTDGHLIANLRQSDGAKFHYEAFNGTIGSSDIHGDLTYVASQPRPKLSGAVVSN
QLLLADLAPLIGADSNAKQKARGGESKQPADKVLPVEEFHTERWRDMDADVEFTGKRIVQ
SEKLPFTDLYTHLVLNDGQISLEPLRFGVAGGKLDAQIRLNGLATPLEGRAKLTARGFKL
KQLFPSFETMKTSFGELNGDADLAGHGNSVAALLGSANGDLKLLMNDGAISRQLMELAGL
NVGNYVVGKIFGDQDVKINCAAADFDVKTGLATSRLFVFDTENAIVYIDGTANMATEQLD
LTITPESKGVRLISLRSPLYVRGKFIKPDTGVKGVPLMLRGAGMVALGVIAGPAAGLLAL
VAPSGGEPNQCAPLLEQMKAGKAPKTVKG