Protein Info for AO353_12365 in Pseudomonas fluorescens FW300-N2E3

Annotation: phosphoribosyl-AMP cyclohydrolase

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 132 PF01502: PRA-CH" amino acids 30 to 104 (75 residues), 116.5 bits, see alignment E=1.9e-38

Best Hits

Swiss-Prot: 96% identical to HIS3_PSEPF: Phosphoribosyl-AMP cyclohydrolase (hisI) from Pseudomonas fluorescens (strain Pf0-1)

KEGG orthology group: K01496, phosphoribosyl-AMP cyclohydrolase [EC: 3.5.4.19] (inferred from 96% identity to pfo:Pfl01_0384)

Predicted SEED Role

"Phosphoribosyl-AMP cyclohydrolase (EC 3.5.4.19)" in subsystem Histidine Biosynthesis (EC 3.5.4.19)

MetaCyc Pathways

KEGG Metabolic Maps

Isozymes

No predicted isozymes

Use Curated BLAST to search for 3.5.4.19

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See A0A0N9VP45 at UniProt or InterPro

Protein Sequence (132 amino acids)

>AO353_12365 phosphoribosyl-AMP cyclohydrolase (Pseudomonas fluorescens FW300-N2E3)
MKDWLDEIKWDSDGLVPAIAQDHKTGRVLMMAWMNREALELTAAENRAIYWSRSRGKLWR
KGEESGHVQTLHEMRLDCDADVIILMVEQIGDIACHTGRQSCFYRVYENGDWKTVDPVLK
DPHAIYSDHKHD