Protein Info for AO353_11900 in Pseudomonas fluorescens FW300-N2E3

Annotation: detoxification

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 377 PF06958: Pyocin_S" amino acids 156 to 286 (131 residues), 99.1 bits, see alignment E=3.1e-32 PF09000: Cytotoxic" amino acids 299 to 376 (78 residues), 99.5 bits, see alignment E=1.1e-32

Best Hits

KEGG orthology group: None (inferred from 61% identity to pfo:Pfl01_2282)

Predicted SEED Role

"Colicin E3 (EC 3.1.-.-)" (EC 3.1.-.-)

Isozymes

Compare fitness of predicted isozymes for: 3.1.-.-

Use Curated BLAST to search for 3.1.-.-

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See A0A0N9WFJ3 at UniProt or InterPro

Protein Sequence (377 amino acids)

>AO353_11900 detoxification (Pseudomonas fluorescens FW300-N2E3)
MPERSYPLTYKEQLRRRILQPPPSPNLYPPIADLPVNRPADPAPNKPLGCVFAKSCKLPD
GIINYANPSGFVPLDSLKDYGNFALLGGRKTDSPGAVQLKKISGSALPIGLGGLALGGSS
VSDITAVGGTVAARLLTGLVALFWPSELGDSALYSEEQLRSLEHANSRVRLRIEQQPDGT
LKGYGFYTGNNAEWQRIPVIQFQTREARQVAVFGEGLELIWTPAIDPADTLGIPALEAAP
QAPNIWVYPPTEASNSILVNPIYPPEYQDFILVFPADSGVRPLYVVVSVRPGDHQYHQKP
TFLPAFPDAVRAPPKTPIRGGGRLRPRWKEPHSYIYEWDFERGKVEKYTKRGKHLGEFDP
ITGERTKDADPKRWIEP