Protein Info for AO353_11345 in Pseudomonas fluorescens FW300-N2E3

Annotation: fusaric acid resistance protein

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 400 450 500 550 600 650 692 transmembrane" amino acids 14 to 34 (21 residues), see Phobius details amino acids 61 to 81 (21 residues), see Phobius details amino acids 87 to 105 (19 residues), see Phobius details amino acids 113 to 131 (19 residues), see Phobius details amino acids 147 to 163 (17 residues), see Phobius details amino acids 365 to 386 (22 residues), see Phobius details amino acids 392 to 409 (18 residues), see Phobius details amino acids 418 to 438 (21 residues), see Phobius details amino acids 444 to 462 (19 residues), see Phobius details amino acids 468 to 488 (21 residues), see Phobius details amino acids 500 to 520 (21 residues), see Phobius details PF04632: FUSC" amino acids 13 to 671 (659 residues), 557.1 bits, see alignment E=6.8e-171 PF13515: FUSC_2" amino acids 26 to 157 (132 residues), 63.9 bits, see alignment E=1.6e-21

Best Hits

KEGG orthology group: None (inferred from 88% identity to pfl:PFL_0155)

Predicted SEED Role

"Inner membrane component of tripartite multidrug resistance system" in subsystem Multidrug Resistance, Tripartite Systems Found in Gram Negative Bacteria

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See A0A0N9VU10 at UniProt or InterPro

Protein Sequence (692 amino acids)

>AO353_11345 fusaric acid resistance protein (Pseudomonas fluorescens FW300-N2E3)
VNGFFSGIPPARDWFYGVRTFAASMIALYIAMLMQMPRPYWAMATVYIVSSPFVGPTSSK
ALYRAIGTLTGAAAALLFVPMFVQSPYVLVLVIALWTGTLLFLSMHLRTANNYALMLAGY
TLPLISLPVVDNPLAIWDVAEARTEEIFLGIVCAAVVGSMFWPRRLAPVFDGAVSKWFSD
AVTYSQRFLTRNVQPDEVSTLRASMVATFNSLELMIGQLPHEGARPQTVRNIKELRGRMI
HLLPVVDALDDALYALQRRTPELVDKFAPLLAATVEWLDRTDASVEHWQALRAQLEALQP
SAEALDDRKQLLFSNALYRLGEWIDLWQDLRSLQEAIRCESQDNWRAVYRHWRLGRLTPF
LDRGLMLYSAASTVLAIIVASVLWILLGWTDGGSAVILAAVACSFFAAMDDPAPQIYRFF
FWTAMSVLFASLYLFLILPNLHDFPMLVLAFAVPFICVGTLTVQPRFYLGMLLTIVNTSS
FISIQGAYDADFLSFANSNLAGPMGLLFAFIWTLVARPFGSELAAKRLTRFSWRDIVGMT
EPANLAEHRHLGVQMLDRLMQHLPRLAMTGQDTGVALREVRVALNLLDLLAYAPRVQGGP
NVLLRQVVAEVGEYFKACLKAGERLPAPAPLLMTLDRTRRALNGQGLEGDGETRLHLLHA
LAGLRLALLPGVEFIGNETDEPFPQGIDGAPL