Protein Info for AO353_11295 in Pseudomonas fluorescens FW300-N2E3

Annotation: glycosyl hydrolase

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 200 400 600 800 1000 1200 1400 1600 1800 2000 2200 2400 2600 2707 PF14252: DUF4347" amino acids 67 to 226 (160 residues), 168.9 bits, see alignment 1.7e-53 PF19078: Big_12" amino acids 591 to 690 (100 residues), 106.6 bits, see alignment (E = 1.4e-34) amino acids 691 to 792 (102 residues), 128 bits, see alignment (E = 3.1e-41) amino acids 793 to 894 (102 residues), 132 bits, see alignment (E = 1.7e-42) amino acids 896 to 996 (101 residues), 122.6 bits, see alignment (E = 1.5e-39) amino acids 997 to 1098 (102 residues), 132.6 bits, see alignment (E = 1.1e-42) amino acids 1099 to 1200 (102 residues), 130.7 bits, see alignment (E = 4.4e-42) amino acids 1201 to 1302 (102 residues), 131.7 bits, see alignment (E = 2.1e-42) amino acids 1303 to 1404 (102 residues), 123.8 bits, see alignment (E = 6e-40) amino acids 1405 to 1506 (102 residues), 128.9 bits, see alignment (E = 1.7e-41) amino acids 1507 to 1608 (102 residues), 126.8 bits, see alignment (E = 7.1e-41) amino acids 1609 to 1710 (102 residues), 123.8 bits, see alignment (E = 6e-40) amino acids 1711 to 1812 (102 residues), 127.6 bits, see alignment (E = 4.1e-41) amino acids 1813 to 1914 (102 residues), 128 bits, see alignment (E = 3.1e-41) amino acids 1915 to 2016 (102 residues), 128.7 bits, see alignment (E = 1.8e-41) amino acids 2017 to 2118 (102 residues), 132.1 bits, see alignment (E = 1.7e-42) amino acids 2119 to 2220 (102 residues), 132.2 bits, see alignment (E = 1.5e-42) amino acids 2221 to 2320 (100 residues), 116.9 bits, see alignment (E = 8.6e-38) amino acids 2323 to 2423 (101 residues), 119.4 bits, see alignment (E = 1.4e-38) amino acids 2425 to 2526 (102 residues), 114 bits, see alignment (E = 6.8e-37)

Best Hits

Predicted SEED Role

"Fibronectin type III domain protein"

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See A0A0N9WBV1 at UniProt or InterPro

Protein Sequence (2707 amino acids)

>AO353_11295 glycosyl hydrolase (Pseudomonas fluorescens FW300-N2E3)
MLFDGAVAATVADTAAQADSHATADAAKAPVTDHPVASKDTHGQADNSSAATPAPAATPT
AVPGQSVVFVDSRIKDADSLLKGVAPGTQVVQLDATKDGLQQIADYLDTHHGVSTVEIIA
HGNSGDLWLGDTYLSADNVAARSAVLARIGNDMNVGGDILIYACNTAAGDKGISFVDSLA
QLTGRDIAASNNRTGVSGDWDLEIATGSIESHNVLSAQSMAAYQYSLATLTVTNNGDSGV
GSLRQALSDSVVGDTVTFSTTMTVNLNAQLTITKDVTLEGDLNHDGIADVTLNGQYKTRV
LQVASGVTATLDGLIIKQGLVAGNGAAAGMDGTASMGGGIFNAGNLTLKNVTVTSNAASG
GGGGGGVTSPYVGGAVGGGGGGGGALGGQSGGHGGTSGFGTGVYGGTSGSANTGGNGGGY
NPNYMGGRGGSSSGGAGGVGAANYSNGGAGGTANNGTISIGGGGGGSGWDKPGRAGASAA
GGIYNASSGTLTVIGTSVISGNIAAGGGGGGGGGLGGSADSGGAAGKGVGAIWNKGTVLM
TAANFAALSGNVGGSGSGGPALGGGSTGASVAAVNNIFNDGGTVNTAYAPAPSATIAVAN
SALHIGQTSLVTITFTEAVTGFTNADLTIANGTLSAVSSSDGGVTWTATLTPTNAINDTT
NLITLDNTGVQSVSMGTAGVGTSTSNNYAIDTVRPTATIAFTDTALKIGDTSLVTFTFSE
AVTGFTNADLTIANGTLTAVSSSDGGTTWTGTFTPTASITDTTNLITLDNTGIADLAGNA
GSGTTDSNNYAIDTVRPTATIVVADTTLTAGETSLVTITFSEAVSGFTNADLSIANGTLS
AVSSSDGGITWTATFTPTDGVSDTTNLITLTNAGVSDLAGNAGSGTTDSGNYVINTAHPT
ATIVVADNVLAIGETSLVTITFSEAVTGFTNADLAIANGTLSAVSSSDGGITWTATFTPT
NAITDATNLITLDNAGVQNAVGNVGLGTTDSNNYAIDTVRPTATIVVADNALKIGDTSLV
TITFSEAVSGFTNADLTITNGTLTAVSSSDGGITWTATFTPSASTTDATNLITLDNTGIA
DLAGNAGSGTTDSNNYAIDTVRPTATIVVADNALKIGDTSLVTITFSEAVTGFTNADLTI
TNGTLTAVSSSDGGITWTATFTPSASTTDATNLITLANTGIADLSGNAGTGTTDSNNYAI
DTARPTATIVVADNALKIGDTSLVTITFSEAVTGFTNADLTIINGTLTAVSSSDGGITWT
ATFTPNASTTDATNLISLDNTGIADLAGNAGSGTTDSNNYAIDTQRPTATIVVTDTALGI
GQTSLVTITFSEAVTGFTNADLTIDNGTLSAVSSSDGGVTWTATLTPVNGITHSGNMITL
DNTGIADLAGNPGAATTDSNTYAIDSQRPTATIVFADPTLAAGETSLVTFTFSEAVTGFT
NADLTIPNGTLTAVSSSDGGITWTATFTPTAGINDTTNLITLANTGVADLAGNAGSGTTD
SGNFTIDTVRPTATIVVADNALKVGDTSLVTITFSEAVTGFTNSDLTIANGTLSAVSSSD
GGVTWTATFTPTSAITDATNLITLDNTGVQNGSGNVGAGTTDSNNYAIDTQRPTATIVVT
DTALGIGQTSLVTITFSEAVTGFTNADLTIDNGTLSAVSSSDGGVTWTATLTPVNGITHS
GNMITLDNTGIADLAGNPGAATTDSNTYAIDSQRPTATIVFADPTLAAGETSLVTFTFSE
AVTGFTNADLTIPNGTLTAVSSSDGGITWTATFTPTAGIKDTTNLITLANTGVADLAGNT
GSGTTDSANFTIDTVRPTATIIVADNALKIGDTSLVTITFSEAVTGFTNADLTIANGTLS
AVSSSDGGITWTATFTPTSAITDATNLITLDNTGVQNGSGNVGTGTTDSNNYAIDTQRPT
ATIVVTDTALGIGQTSLVTITFSEAVTGFTNADLTIANGTLTAVSSSDGGITWIATFTPS
ASITDATNLITLDNTGVADLAGNAGTGSTDSNNYTIDTVRPTATIVVADSTLTAGETSLV
TITFSEAVTGFDNSDLSVSNGTLTNVSSSDGGITWTATFTPTSGIKDPTNLISLNNTGVA
DLIGNAGSGTTDSGNFTIDTQRPTATIVVADNALKIGETSLVTITFSEAVSGFTNADLTI
ANGTLSAVSSSDGGITWTATFTPAANITDTTNLITLDNTGVQNISGNVGVGTTDSNNYAI
DTQRPTASIVVANPLLGIGQTSQVTITFSEAVSGFDLSDLSVANGTLSNLLSSDGGKTWT
ATLTPTAAVNDATNQIVLDTANVQDSAGNAGSTVSLSNNYVLDADRPTGTIVVAKPLLGI
GQTSGVTITFSEAVNGFDLSDLSVTNGTLSNLASSDGGKTWTATFTPTANVTDATNLIVL
DNSNVNDAAGNAGTGLAISNNYALDSDRPTATIVIANPNLGVGQTSQVTFSFSEAVKHFD
LSDISVANGTLTNLSSSNGGKTWTATLTPAANISDATNFIGLDTSNVTDRAGNAGTGVAI
SNNFTVNTVPAVVVLVSDPTPPQSTPNIPLQPIVFAPPTGNLGSPLTFAPLFEQRVLGDG
IRPLGDIFINRGALSPSYIAQVFTSSDSGGNGSAHGFLGFGGGDGGVFGSSTLSSLFSHE
SGNGDSSFNAFGDKSIQHGGDAAQGLHGVYGALTLGEQLQQLENAEKQQIQALAAALQQV
GISEMQA