Protein Info for AO353_10230 in Pseudomonas fluorescens FW300-N2E3

Annotation: glycosyltransferase

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 400 434 PF13692: Glyco_trans_1_4" amino acids 272 to 346 (75 residues), 28.5 bits, see alignment E=8.5e-11

Best Hits

KEGG orthology group: None (inferred from 85% identity to pfo:Pfl01_5679)

Predicted SEED Role

No annotation

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See A0A0N9WHI7 at UniProt or InterPro

Protein Sequence (434 amino acids)

>AO353_10230 glycosyltransferase (Pseudomonas fluorescens FW300-N2E3)
MLIIIHSETNQHTIAQNLGRSEYSYYFVLKEYRPVLERLGRVVEVSDPQTEVDALYLDCL
SRGEDCVFLSFSPPHRTPVHFACPTLAVFAWEFSTIPNEPFAGEPHNDWRTVLRASGAAI
THSSYTVNAVREAMGADYPIVAVPAPVWDRFASRGAQLQRQPLACQVRLKIGGLLADSRQ
LDLRAFGPAHLRAGKGIDFQAPAREHDLVLDGVIYTSVFNPSDGRKNWEDMLSAFCVTFR
EVEDATLVLKLTHHDAEEALTDILHHLYKNQSYRCRIVLIYGYLADADYERLVQATSYVV
NTSYGEGQCLPLMEFMSCGKPAVAPRTTAMIDYLDVDNAFLIDTTDELTAWPHDPRRAFR
TLRYVTNWASLCRAYRASYEVAKDDPGRYAQMSTHAVASLETFCSQATAEQRLEGFFARL
FKSRAVSAVETPKA