Protein Info for AO353_08765 in Pseudomonas fluorescens FW300-N2E3

Annotation: hypothetical protein

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 185 PF03695: UPF0149" amino acids 10 to 171 (162 residues), 123.5 bits, see alignment E=6e-40

Best Hits

Swiss-Prot: 92% identical to Y5969_PSEF5: UPF0149 protein PFL_5969 (PFL_5969) from Pseudomonas fluorescens (strain ATCC BAA-477 / NRRL B-23932 / Pf-5)

KEGG orthology group: K09895, hypothetical protein (inferred from 92% identity to pfl:PFL_5969)

Predicted SEED Role

"FIG001590: Putative conserved exported protein precursor"

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See A0A0N9WI06 at UniProt or InterPro

Protein Sequence (185 amino acids)

>AO353_08765 hypothetical protein (Pseudomonas fluorescens FW300-N2E3)
MPIQNSPYQAFATLLSTSGHPVSPAELHGLLLGRSCAGAGFEADGWLVDAAELLEGEPQD
NVRNALIGLQEMVKGELTSDDMTVVLLLPTDDALLTERAVALGQWCQGFLSGFGLNCRDS
SMLSAEATEVLQDLAAIAQVQDALEESDDGESDYMEVMEYLRVAPLLLFTENNKAAAPAA
KPSLH