Protein Info for AO353_08725 in Pseudomonas fluorescens FW300-N2E3

Annotation: aminotransferase DegT

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

• PF01041: DegT_DnrJ_EryC1
  • amino acids 13 to 373 (361 residues), 359 bits, E=1.6e-111

Best Hits

KEGG orthology group: None (inferred from 93% identity to pfl:PFL_5960)

Predicted SEED Role

"UDP-4-amino-4-deoxy-L-arabinose--oxoglutarate aminotransferase (EC 2.6.1.-)" in subsystem Lipid A-Ara4N pathway ( Polymyxin resistance ) (EC 2.6.1.-)

KEGG Metabolic Maps

• Aminophosphonate metabolism
• Arginine and proline metabolism
• Caprolactam degradation
• Lysine biosynthesis
• Lysine degradation
• Methionine metabolism
• Nucleotide sugars metabolism

Isozymes

Compare fitness of predicted isozymes for: 2.6.1.-

Use Curated BLAST to search for 2.6.1.-

Sequence Analysis Tools

See A0A0N9W494 at UniProt or InterPro

Protein Sequence (379 amino acids)

>AO353_08725 aminotransferase DegT (Pseudomonas fluorescens FW300-N2E3)
MSQLPFLPFSKPTIDEATIAAVGDVLRSGWITSGPKVQAFEAQLSEFFGGRPVRTFNSGT
CTMEIALRIAGIGAGDEVITTPISWVATANVILEVGATPVFADIDPITRNIDLDQLEAAI
TPRTKAIIPVFLAGLPVDMSRLYAIAKKHSLRIIEDAAQALGSSWNGQRIGSTGDFVSFS
FQANKNVTSSEGGCLVLNNAEEVRLAEKYRLQGVTRTGFDGLDVDVLGGKFNMTDVAAAI
GLGQFAHIEAITAHRRELAKHYFACFGSDFEAKYGAQLPPADFTNSNWHLFQLVLPERKD
GKPARATFMEQMQELGVGIGYHYPPIHLLSLYRERGFKEGMFPVSERVGRLIVSLPMFTA
MSKSDVERSVAAVKAVLQA