Protein Info for AO353_08670 in Pseudomonas fluorescens FW300-N2E3
Annotation: NADPH-dependent FMN reductase
These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.
Protein Families and Features
Best Hits
Swiss-Prot: 77% identical to SSUE_PSEPU: FMN reductase (NADPH) (ssuE) from Pseudomonas putida
KEGG orthology group: K00299, FMN reductase [EC: 1.5.1.29] (inferred from 94% identity to pba:PSEBR_a5413)Predicted SEED Role
"FMN reductase (EC 1.5.1.29)" in subsystem Alkanesulfonate assimilation or Alkanesulfonates Utilization (EC 1.5.1.29)
MetaCyc Pathways
- adenosylcobalamin biosynthesis II (aerobic) (31/33 steps found)
- two-component alkanesulfonate monooxygenase (2/2 steps found)
- 5,6-dimethylbenzimidazole biosynthesis I (aerobic) (2/3 steps found)
- dibenzothiophene desulfurization (1/5 steps found)
- bacterial bioluminescence (3/8 steps found)
Isozymes
No predicted isozymesUse Curated BLAST to search for 1.5.1.29
Sequence Analysis Tools
PaperBLAST (search for papers about homologs of this protein)
Search CDD (the Conserved Domains Database, which includes COG and superfam)
Predict protein localization: PSORTb (Gram-negative bacteria)
Predict transmembrane helices and signal peptides: Phobius
Check the current SEED with FIGfam search
Find homologs in fast.genomics or the ENIGMA genome browser
See A0A0N9WE81 at UniProt or InterPro
Protein Sequence (197 amino acids)
>AO353_08670 NADPH-dependent FMN reductase (Pseudomonas fluorescens FW300-N2E3) MLVVSLGGSPSQRSRSGVLLDRSQRWLQQQGVEVVSYQVRDFPAEDLLHARFDSPKVVDL LQQIENADGLLIATPVYKASFSGALKTVLDLLPERALSHKVVLPMATGGSIAHMLAVDYA LKPVLSALKAQEMLHGIFAEDSQIAYGEGSAQAQLSPALEQRLVEALEQFFSAMARRPKP LDPNLLNERLLSARWSI