Protein Info for AO353_08410 in Pseudomonas fluorescens FW300-N2E3

Annotation: sulfate ABC transporter ATP-binding protein

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 358 TIGR03265: putative 2-aminoethylphosphonate ABC transporter, ATP-binding protein" amino acids 16 to 358 (343 residues), 515.4 bits, see alignment E=4.1e-159 PF00005: ABC_tran" amino acids 31 to 171 (141 residues), 117.7 bits, see alignment E=1.3e-37 PF08402: TOBE_2" amino acids 284 to 357 (74 residues), 24.3 bits, see alignment E=5.5e-09

Best Hits

KEGG orthology group: K02010, iron(III) transport system ATP-binding protein [EC: 3.6.3.30] (inferred from 94% identity to pfl:PFL_5890)

Predicted SEED Role

"Ferric iron ABC transporter, ATP-binding protein" in subsystem Iron acquisition in Vibrio or Transport of Iron

Isozymes

Compare fitness of predicted isozymes for: 3.6.3.30

Use Curated BLAST to search for 3.6.3.30

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See A0A0N9VT66 at UniProt or InterPro

Protein Sequence (358 amino acids)

>AO353_08410 sulfate ABC transporter ATP-binding protein (Pseudomonas fluorescens FW300-N2E3)
MNHPNATAQAFPGAPMKVRGIEKRFGAFTALDNVSLDVAAGELVCLLGPSGCGKTTLLRC
IAGLERQDRGELYLGDRNVSLLAPQARDYGILFQSYALFPNLTVEANIAYGLAGSGREEV
RKRVAQMLELVGLIGSEKKYPGQLSGGQQQRVALARALAPAPSLLLLDEPMSALDARVRE
HLCTELRQLQRNLGITTLMVTHNQDEAMLMADRIAVMNNGKVEQYATPQEIYNRPATPFV
AEFVGQGNWLPFQRSSDSHAQVGGMNVRLADNSGKAASGRLFCRPEAISINPPVHEENLF
PAKVREITFLGNRCRMSFELNQLPGHALLAELAPEAMPRLGAQDIMVALPPRSLQVFA