Protein Info for AO353_08335 in Pseudomonas fluorescens FW300-N2E3

Annotation: MFS transporter

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 400 transmembrane" amino acids 21 to 43 (23 residues), see Phobius details amino acids 57 to 75 (19 residues), see Phobius details amino acids 87 to 106 (20 residues), see Phobius details amino acids 112 to 132 (21 residues), see Phobius details amino acids 144 to 165 (22 residues), see Phobius details amino acids 175 to 194 (20 residues), see Phobius details amino acids 224 to 246 (23 residues), see Phobius details amino acids 257 to 278 (22 residues), see Phobius details amino acids 290 to 310 (21 residues), see Phobius details amino acids 317 to 342 (26 residues), see Phobius details amino acids 349 to 369 (21 residues), see Phobius details amino acids 375 to 392 (18 residues), see Phobius details PF07690: MFS_1" amino acids 26 to 364 (339 residues), 145.6 bits, see alignment E=1.9e-46 PF00083: Sugar_tr" amino acids 53 to 166 (114 residues), 35.8 bits, see alignment E=4.7e-13

Best Hits

KEGG orthology group: None (inferred from 42% identity to pfo:Pfl01_5357)

Predicted SEED Role

No annotation

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See A0A0N9WGL8 at UniProt or InterPro

Protein Sequence (400 amino acids)

>AO353_08335 MFS transporter (Pseudomonas fluorescens FW300-N2E3)
MSESTCSPSISGDVKRQQLSRFILITCISLISFFPINILLPSFPALGSRFDTPTAEVALS
ISLFTLVFSISQLIAGPLSDKWGRKEVLIGCITLSILGAIGCALAPNYLAFLLFRGVQAI
GCGFFVLGHALVEDLFDEQDRARVRLYYMTLSGSFVALSPLIGSWLQTTFDWQGSFYGFA
AMALGMLIHAFCILPSKSASPHREPSSIIGTLKAVIRNGDFLRYWWIAALVFACYFALIS
VTPLIFMDALKLSEYQYALVLMVYGVAYLLGGVAASYLQKRIALSRQINIGLGLLCVAGV
LLTLILSFDVITTVTLLIPMLISALAVTLVRPAAISAAMLLFSSSAGTAASAGNSIMFLT
AAVSSAALAQAGDHLLMTIAFSFIGLSLWGLLTNHRTGRR