Protein Info for AO353_07455 in Pseudomonas fluorescens FW300-N2E3

Annotation: peptidase S9

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 400 450 500 550 610 PF20434: BD-FAE" amino acids 379 to 565 (187 residues), 28.3 bits, see alignment E=2.5e-10 PF00326: Peptidase_S9" amino acids 400 to 606 (207 residues), 161.8 bits, see alignment E=3.5e-51 PF01738: DLH" amino acids 529 to 591 (63 residues), 29.6 bits, see alignment E=1e-10

Best Hits

KEGG orthology group: None (inferred from 77% identity to pba:PSEBR_a5170)

Predicted SEED Role

"Coenzyme PQQ synthesis protein F (EC 3.4.99.-)" in subsystem Coenzyme PQQ synthesis or Pyrroloquinoline Quinone biosynthesis (EC 3.4.99.-)

Isozymes

Compare fitness of predicted isozymes for: 3.4.99.-

Use Curated BLAST to search for 3.4.99.-

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See A0A0N9VRU5 at UniProt or InterPro

Protein Sequence (610 amino acids)

>AO353_07455 peptidase S9 (Pseudomonas fluorescens FW300-N2E3)
MNGTHASSLKAEPLSALKAVAAGVDFTDLCVGAQGLFWNEYRPEDGACRIWHWRDNTAHC
LTPPGFSARSRVYEYGGGSFCLSDDGVVFVNETDQQLYRQSLAGEMPQALTMGECRYGDL
QFADEQVLAVEEQGDQHRLVAIDPADGKRQLLAEGADFYSAPTLSPDAGRLAWIEWSRPH
QPWTATRLMVAERDANGAFGRPRCVAGDASEESLQQPRFDDAGRLYCLTDRAGFWQPWVE
TGSGLQPLPSSDADHAPAPWQLGGCTWLPLDEKNYLANWTVEGFGRLGLRSGDSVEDFTG
DYSRFRNLALDQESVYCIAASPVSPSAVIAINRKSHQVRVLAGGVAPLPAKHISQPQTLR
YPSGTGEAHGFFYPAMTDVAKPPLLVFIHGGPTSACYPMLDPRIQYWTQRGFAVADLNYR
GSSGYGRAYRQALHLSWGDVDVEDACAVVAYLAGQGLIDGDYAFIRGGSAGGYTTLCALA
FRDVFSAGASLYGVSDPAALGRTTHKFEGDYLDWLIGDPQQDAERYVARTPLLHASEIRV
PVIFFQGELDAVVVPQQTRDMLKALQDNGISAQAHYYPDERHGFRKASNQAHVLEQEWLF
YREVMEQKNA