Protein Info for AO353_07360 in Pseudomonas fluorescens FW300-N2E3

Annotation: dihydroneopterin aldolase

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 117 TIGR00525: dihydroneopterin aldolase" amino acids 2 to 114 (113 residues), 83.2 bits, see alignment E=1.9e-27 TIGR00526: FolB domain" amino acids 2 to 115 (114 residues), 102.4 bits, see alignment E=1.9e-33 PF02152: FolB" amino acids 4 to 113 (110 residues), 110 bits, see alignment E=4.9e-36

Best Hits

Swiss-Prot: 50% identical to FOLB_ECOL6: Dihydroneopterin aldolase (folB) from Escherichia coli O6:H1 (strain CFT073 / ATCC 700928 / UPEC)

KEGG orthology group: K01633, dihydroneopterin aldolase [EC: 4.1.2.25] (inferred from 91% identity to pfl:PFL_5658)

MetaCyc: 50% identical to dihydroneopterin aldolase (Escherichia coli K-12 substr. MG1655)
RXN-10856 [EC: 5.1.99.8]; Dihydroneopterin aldolase. [EC: 5.1.99.8, 4.1.2.25]

Predicted SEED Role

"Dihydroneopterin aldolase (EC 4.1.2.25)" in subsystem Folate Biosynthesis (EC 4.1.2.25)

MetaCyc Pathways

KEGG Metabolic Maps

Isozymes

No predicted isozymes

Use Curated BLAST to search for 4.1.2.25 or 5.1.99.8

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See A0A0N9VM10 at UniProt or InterPro

Protein Sequence (117 amino acids)

>AO353_07360 dihydroneopterin aldolase (Pseudomonas fluorescens FW300-N2E3)
LDRVFIEGLEVDTVIGAYDWERGIRQCLRLDLNFAWDNRPAAAGDDLALALDYASVTARI
QAFAEQAQYQLVETFAERLAEVLMSEFKITWLRLKLTKPGAIPAATGVGVEIERGCR