Protein Info for AO353_06565 in Pseudomonas fluorescens FW300-N2E3

Annotation: ethanolamine permease

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 400 456 transmembrane" amino acids 12 to 31 (20 residues), see Phobius details amino acids 42 to 62 (21 residues), see Phobius details amino acids 89 to 113 (25 residues), see Phobius details amino acids 126 to 146 (21 residues), see Phobius details amino acids 152 to 176 (25 residues), see Phobius details amino acids 189 to 209 (21 residues), see Phobius details amino acids 229 to 250 (22 residues), see Phobius details amino acids 281 to 301 (21 residues), see Phobius details amino acids 330 to 348 (19 residues), see Phobius details amino acids 355 to 378 (24 residues), see Phobius details amino acids 397 to 416 (20 residues), see Phobius details amino acids 422 to 439 (18 residues), see Phobius details TIGR00908: ethanolamine permease" amino acids 6 to 450 (445 residues), 621.6 bits, see alignment E=3.9e-191 PF13520: AA_permease_2" amino acids 11 to 417 (407 residues), 150.2 bits, see alignment E=8.8e-48 PF00324: AA_permease" amino acids 19 to 422 (404 residues), 116 bits, see alignment E=1.9e-37

Best Hits

KEGG orthology group: None (inferred from 95% identity to pfo:Pfl01_4990)

Predicted SEED Role

"Ethanolamine permease" in subsystem Ethanolamine utilization

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See A0A0N9WD06 at UniProt or InterPro

Protein Sequence (456 amino acids)

>AO353_06565 ethanolamine permease (Pseudomonas fluorescens FW300-N2E3)
MTSSTTLKPTLGTLHLWGIAVGLVISGEYFGWSYGWGTAGTLGFLVTALMVATMYTCFIF
SFTELTTAIPHAGGPFAYSRRAFGEKGGLIAGIATLIEFVFAPPAIAMAIGAYLNVQYPD
LDPKLAAVGAYFVFMGLNILGVSIAATFELVVTVLAVAELLVFMGVVAPGFSFSNFVLNG
WSGSNEFTVASIPGIFAAIPFAIWFFLAIEGAAMAAEEAKDPKRTIPRAYVSGILTLVFL
AIGVMVMAGGVGDWRQLANINDPLPQAMKAVVGNNSSWMHMLVWIGLFGLVASFHGIILG
YSRQFFALARAGYLPRGLAKLSRFQTPHRAILAGGVIGIAAIYSDGLVNLQGMTLTAAMI
TMSVFGAIVMYIISMLSLFKLRKTEPLLERTFRAPGYPIVPGIALFLAVVCLVAMAWFNT
LIGMIFLGFMVAGFIYFQLTAKQRFDAPADAMLTGI