Protein Info for AO353_04805 in Pseudomonas fluorescens FW300-N2E3

Annotation: hypothetical protein

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 423 TIGR02608: delta-60 repeat domain" amino acids 43 to 88 (46 residues), 32.5 bits, see alignment 3e-12 amino acids 102 to 151 (50 residues), 28 bits, see alignment 7.7e-11 amino acids 161 to 208 (48 residues), 18.1 bits, see alignment 9.7e-08 amino acids 221 to 265 (45 residues), 39 bits, see alignment 2.7e-14 amino acids 346 to 379 (34 residues), 28.3 bits, see alignment 6.1e-11 PF17164: DUF5122" amino acids 68 to 82 (15 residues), 21.2 bits, see alignment (E = 1.5e-08) amino acids 227 to 262 (36 residues), 25.6 bits, see alignment 6e-10 amino acids 346 to 375 (30 residues), 30.5 bits, see alignment (E = 1.8e-11)

Best Hits

Predicted SEED Role

No annotation

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See A0A0N9WRF0 at UniProt or InterPro

Protein Sequence (423 amino acids)

>AO353_04805 hypothetical protein (Pseudomonas fluorescens FW300-N2E3)
MDAITHNQITFFIPGDRDPHFGLEGVITLFELKHALDTDRHVKGFTVLADDKILVSAWLA
RDLKGIYGLARFNPDGSVDTSFADMGLAQGNFADGYDSTGGQLAVQDDGHIIMLGWSREV
DVYSPKRLVIARFDINGLVDRSFGEQGCVVIENSALGELVDDSSTLQLLADGTILVSATY
LKGDTSSGLVLRVDTRGNLDKSFNKTGQLEINHQAFSSLSVTAIRVQADNTILVAGSARR
SPSETQGYVARYSHTGELDTNFGGTQTPGFSLVNIPNGTVIFHELIDTAAGNVVGIGQAS
SGQRNWGLLVGFDTTGNPFPEFNQGRPVLTSFNADHGNEWVCATRQADGSIITAGGSSRL
YIARYLANGSVDRSFGQNGCIQEDTQLVTTPALLQTQATGRILLAGNTLGLGGALGHVYG
YQG