Protein Info for AO353_04735 in Pseudomonas fluorescens FW300-N2E3

Annotation: mannose-1-phosphate guanylyltransferase

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 400 450 483 TIGR01479: mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase" amino acids 1 to 468 (468 residues), 733.1 bits, see alignment E=7e-225 PF00483: NTP_transferase" amino acids 3 to 285 (283 residues), 218.9 bits, see alignment E=1.7e-68 PF12804: NTP_transf_3" amino acids 4 to 129 (126 residues), 31.9 bits, see alignment E=2.9e-11 PF01050: MannoseP_isomer" amino acids 314 to 464 (151 residues), 258 bits, see alignment E=5.4e-81 PF07883: Cupin_2" amino acids 381 to 448 (68 residues), 38.5 bits, see alignment E=1.5e-13

Best Hits

Swiss-Prot: 93% identical to ALGA_PSEFL: Alginate biosynthesis protein AlgA (algA) from Pseudomonas fluorescens

KEGG orthology group: None (inferred from 97% identity to pba:PSEBR_a4601)

MetaCyc: 81% identical to phosphomannose isomerase / GDP-D-mannose pyrophosphorylase (Pseudomonas aeruginosa)
Mannose-6-phosphate isomerase. [EC: 5.3.1.8]; Mannose-1-phosphate guanylyltransferase. [EC: 5.3.1.8, 2.7.7.13]

Predicted SEED Role

"Mannose-6-phosphate isomerase (EC 5.3.1.8) / Mannose-1-phosphate guanylyltransferase (GDP) (EC 2.7.7.22)" in subsystem Alginate metabolism or Mannose Metabolism (EC 2.7.7.22, EC 5.3.1.8)

MetaCyc Pathways

KEGG Metabolic Maps

Isozymes

Compare fitness of predicted isozymes for: 2.7.7.13, 2.7.7.22, 5.3.1.8

Use Curated BLAST to search for 2.7.7.13 or 2.7.7.22 or 5.3.1.8

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See A0A0N9WDX8 at UniProt or InterPro

Protein Sequence (483 amino acids)

>AO353_04735 mannose-1-phosphate guanylyltransferase (Pseudomonas fluorescens FW300-N2E3)
MIPVILSGGSGSRLWPLSRKQFPKQFLALTGEQTLFQQTLERLVFEGMDSPIVVCNKDHR
FIVNEQLSNRKLEAQRILMEPFGRNTAPAVAMTAMMLVNEGRDELMLVLPADHVLEDQKA
LQRALALATVAAERGEMVLFGVPATKPETGYGYIKSANDALLPEGVSRVSHFVEKPDVKR
ATEFVEAGGYFWNSGMFLFRASRFLEELKKHDPDIYDTCLLTLERSEQDADTITFDEATF
ACCPDNSIDYAVMEKTRRACVVPLSAGWSDVGCWSSLWDVHEKDANGNVTKGDVVIQDSR
NCMIHGNGKLVSVIGLENIVVVETKDAMMIAHKDKVQGVKQMVNTLNEQGRSETQNHCEV
YRPWGSYDSVDMGGRFQVKHISVKPGACLSLQMHHHRAEHWIVVSGTAEVTCDENVFLLC
ENQSTYIPIASVHRLRNPGKIPLEIIEVQSGSYLGEDDIERFEDIYGRSTPIERGVSVKT
IAQ