Protein Info for AO353_04665 in Pseudomonas fluorescens FW300-N2E3

Annotation: ATPase

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 400 463 PF13638: PIN_4" amino acids 15 to 159 (145 residues), 112.4 bits, see alignment E=2.9e-36 PF02562: PhoH" amino acids 254 to 447 (194 residues), 139.3 bits, see alignment E=1.9e-44

Best Hits

KEGG orthology group: K07175, PhoH-like ATPase (inferred from 97% identity to pba:PSEBR_a4587)

Predicted SEED Role

"Predicted ATPase related to phosphate starvation-inducible protein PhoH" in subsystem Phosphate metabolism

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See A0A0N9WEL2 at UniProt or InterPro

Protein Sequence (463 amino acids)

>AO353_04665 ATPase (Pseudomonas fluorescens FW300-N2E3)
MDDHGRSPSNLPILYVLDTNVLIHDPNALLNFEEHHVAIPMTVLEELDKLKSGHHSVAAE
CRQAIRLIDNTLGDASPEDVEQGVPIQRGKSGPKGLLSILMSKRTEPNIVLPEHLNDNII
INQLIDLHARDKELRVVLVTKDINMRLKARACGIAAEDYSTDQLVDDVSLLPNGYHNMTG
SFWDRVSKVETRQDHGRTWHQVQLIDNLPAVHINEFIIDEQGFVGWIKEIQVDKLLILDL
HQEPLLHQEAWGLKPRDIYQSLALYALLDPDIHLVNLSGAAGSGKTILALAAAIEQTMVS
KRYRRIIATRSVQGLDQEIGFLPGTEAEKMEPWLGAITDNLEALHMDDESTHGSVDYILS
KVPLQFKSLNYIRGRSFQQSLILIDECQNLTPHQMKTIITRAGAGSKVVCLGNLAQIDTP
YLSATSSGLTYLTERFKDFPNGVHITLQGVPRSILAEYAESHL